Transcript Information: S_Transcript_175363.p1


Annotated TAIR IDAT2G42490.1
Annotated Gene NameCopper amine oxidase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17691600-17695526 | Reverse length=776
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83491768580958
Replicate 21.4708526371677
Replicate 31.4705972563394
Condition 2: 8 Hour
Replicate 14.1814490817908
Replicate 23.9479732893635
Replicate 33.5665731940361
Condition 3: 24 Hour
Replicate 11.0565499204601
Replicate 21.1554100019314
Replicate 31.3517697001435


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_175363.p1 GENE.S_Transcript_175363~~S_Transcript_175363.p1 ORF type:complete len:765 (+),score=142.06,Cu_amine_oxid|PF01179.16|9.4e-154,Cu_amine_oxidN3|PF02728.12|3.2e-28 S_Transcript_175363:288-2582(+)
ATGGCCGCAGTTTCGCAAAAGACGACGCATCCGGATAACGACGACGTCGTTTCACGCTGGAACGATGATGATGACGAGGTGGCGAGTAAAGTAATTCAACCTCGTGATTCTATTTCTTCTGGCCTTGATCATTCTACGACTACTATCACAACAACAATGTCGAATAAAGGCATCCAGATCATGCCAAAAGCTCGAAACAGCCATCCTTTGGACCCTCTTACAGCAGCTGAAATCTCAGTTGCTGTGGCTACTGTCCGCGCTGCTGGTACGACACCTGAGGTTAGAGACGGCATGCAGTTTATTGAAGTCGCTCTGGTTGAACCAGAAAAACATGTTGTTGCAGTAGCAGATGCATATTTCTTTCCCCCTTTTCAGCCATCTTTAGTTCAGAGAACTAAAGGTGGATCTGTACTTCCTAGCAAGCTACCACCAAGACGGGCAAGGCTTATTGTTTATAATAAAAAAACGAATGAGACAAGTATATGGATTGTGGAGCTCTCCGAAGTGCATGCAGTAGCTCGAGGTGGTCACCACAGGGGAAAAGTTATCTCCTCAAGTGTTGTCCCCGAGGTCCAGCCTGCTATGGATGCTGTAGAGTATGCGGAATGTGAAGCTGTTGTGAAAGATTATCCTCCATTTCGAGAAGCAATGAAGAAGAGGGGGATTGAGGATATGGATCTAGTTATGGTTGATGCCTGGTGTGTTGGATATTATAGTGAGGCTGATTCACCGAGCAGGAGACTTGCAAAACCACTTACATTTTGTAGAACTGAGGGTGACTGCCCAATGGAGAATGGCTATGCACGCCCTGTTGAAGGCATCCACGTTGTTGTTGATCTGCAAAACATAGTTATCATTGAGTTTGAGGACCACAGATTTGTTCCCCTCCCCCCTGCAGATCCTTTGAGGAATTACGCACCAGGTGAGACAAGAGGTGGACAAGATCGTAGTGATGTGAAGCCACTTCATATACTTCAGCCAGAAGGTCCAAGCTTTCGTATTGATGGACGTTTTGTCGAGTGGCAGAAGTGGAATTTTCGCATAGGCTTTACTCCTCGGGAGGGTTTAGTTTTATATTCGGTGGCATACGTAGATGGCAGTCGTGGTCGGAGATCTGTGGCTCATAGATTGAGTTTTGTTGAGATGGTTGTCCCATATGGAGATCCTCATGAACCGCATTACAGGAAAAATGCTTTTGATGCTGGTGAAGATGGGCTTGGGAAAAATGCACATTCTCTTAAGAAGGGATGTGATTGCTTAGGCTTTATCAAATACTTTGATGCTCACCTCACAACTTTCACTGGGGAAGTAGAGACAATTGAGAATTGTGTATGTCTGCATGAAGAAGATCATGGAATCTTATGGAAGCATCAAGACTGGAGAACTGGTTTTGCTGAAGTTCGGAGGTCTAGAAGGCTGACAGTTTCTTTTATATGTACAGTTGCTAATTATGAGTATGGATTCTATTGGCACTTCTATCAGGACGGAAAAATTGAGGCCGAAGTTAAACTCACTGGAATTCTCAGCTTAGGGGCCTTGTCTCTTGGTGAATCTCGGAAATATGGTACAATGATTGCCCCTGGATTGTATGCACCTGTTCACCAGCATTTCTTTGTTGCTCGTATGGATATGGCAGTTGATTGTAAACCTGGGGAGGCACTGAATCAGGTTGCTGAGTTGAATGTTAAAGTTGAAGATCCAGGGGACAACAATGTCCATGATAATGCTTTTTACGCTAAAGAGACCATTCTGAAATCAGAACTAGAAGCCATGCGTGATTGCAATCCTTTATCGGCTCGGCATTGGATTGTCAGAAATACTAGGACGGTTAACAGGACAGGGCAGTTGACAGGATACAAATTGGTCCCTGGGTCTAATTGTCTGCCGTTGGCAGGTCCTGGAGCAAAATTCCTAAGAAGAGCTGCTTTTTTGAAGCATAATCTTTGGGTTACATCCTATGCACGCGATGAAATGTTTCCTGGGGGCGAGTTTCCGAATCAGAATCCACGAGTTAGTGAGGGATTGGCCACATGGATTAAGAAAAATCGATCTCTTACTGAAAATGATGTAGTCCTTTGGTATGTTTTTGGAGTCACACATGTTCCTCGGTTAGAAGATTGGCCTGTTATGCCAGTGGAGCGGATTGGTTTCATGCTTATGCCTCATGGATTTTTCAACTGCTCTCCCGCGGTGGACGTTCCACCAAGTTCTTGTGAATCAGATGTCAAGGGAAGCGATGTGAAAGATTATGGTTTGACCAAATCAATCACCCCTGCGTTGGTTGCAAAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_175363.p1 GENE.S_Transcript_175363~~S_Transcript_175363.p1 ORF type:complete len:765 (+),score=142.06,Cu_amine_oxid|PF01179.16|9.4e-154,Cu_amine_oxidN3|PF02728.12|3.2e-28 S_Transcript_175363:288-2582(+)
MAAVSQKTTHPDNDDVVSRWNDDDDEVASKVIQPRDSISSGLDHSTTTITTTMSNKGIQIMPKARNSHPLDPLTAAEISVAVATVRAAGTTPEVRDGMQFIEVALVEPEKHVVAVADAYFFPPFQPSLVQRTKGGSVLPSKLPPRRARLIVYNKKTNETSIWIVELSEVHAVARGGHHRGKVISSSVVPEVQPAMDAVEYAECEAVVKDYPPFREAMKKRGIEDMDLVMVDAWCVGYYSEADSPSRRLAKPLTFCRTEGDCPMENGYARPVEGIHVVVDLQNIVIIEFEDHRFVPLPPADPLRNYAPGETRGGQDRSDVKPLHILQPEGPSFRIDGRFVEWQKWNFRIGFTPREGLVLYSVAYVDGSRGRRSVAHRLSFVEMVVPYGDPHEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGFIKYFDAHLTTFTGEVETIENCVCLHEEDHGILWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALSLGESRKYGTMIAPGLYAPVHQHFFVARMDMAVDCKPGEALNQVAELNVKVEDPGDNNVHDNAFYAKETILKSELEAMRDCNPLSARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPGAKFLRRAAFLKHNLWVTSYARDEMFPGGEFPNQNPRVSEGLATWIKKNRSLTENDVVLWYVFGVTHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPSSCESDVKGSDVKDYGLTKSITPALVAKL*

Click here to download the sequence:
Link to NCBI Protein BLAST