Transcript Information: S_Transcript_175372.p1


Annotated TAIR IDAT3G46020.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:16912511-16913250 | Reverse length=102
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9337166715947
Replicate 21.5635047717924
Replicate 31.7426207323087
Condition 2: 8 Hour
Replicate 11.5112481327102
Replicate 23.6992820585375
Replicate 32.5176197958639
Condition 3: 24 Hour
Replicate 12.0640834794262
Replicate 23.2121937667264
Replicate 32.9789816226515


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_175372.p1 GENE.S_Transcript_175372~~S_Transcript_175372.p1 ORF type:3prime_partial len:127 (-),score=19.79,RRM_1|PF00076.18|1.3e-20,RRM_6|PF14259.2|1.6e-13,RRM_5|PF13893.2|6.9e-09 S_Transcript_175372:2-379(-)
ATGAAGCTAGAAATCCCTCAACCCAGCTTGGCAGTGTGTAGTTGGAAACTGAGTGGAGTTTGGCGGAAGATTAACCAAGTGTTTATGAATACAGATATCATTGAGAGTCAAATGAACAGGATAACTTCAACCTTCCGTTGCTTAACTACATCCAAGCCTCTGTACACAGCTGTCAGATTCAGCTCCGAGCTCTTTGTTAGTAGACTTTCATTTTACACTACAAATGAGGAATTAAAGGGCATTTTTTCCCTATTTGGGGATGTCAAAGAAGTAAGGCTGATAACGGATCCCAGAACAGGAAGGCCAAAAGGGTTTGGTTTTGTAAAGTTTGAGACTGAGGTTGAGGCTCAAAATGCTGCAAAGGCTTTAAATGGCAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_175372.p1 GENE.S_Transcript_175372~~S_Transcript_175372.p1 ORF type:3prime_partial len:127 (-),score=19.79,RRM_1|PF00076.18|1.3e-20,RRM_6|PF14259.2|1.6e-13,RRM_5|PF13893.2|6.9e-09 S_Transcript_175372:2-379(-)
MKLEIPQPSLAVCSWKLSGVWRKINQVFMNTDIIESQMNRITSTFRCLTTSKPLYTAVRFSSELFVSRLSFYTTNEELKGIFSLFGDVKEVRLITDPRTGRPKGFGFVKFETEVEAQNAAKALNGR

Click here to download the sequence:
Link to NCBI Protein BLAST