Transcript Information: S_Transcript_17549.p1


Annotated TAIR IDAT1G71210.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:26838850-26841489 | Reverse length=879
E-Value1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0128854606219
Replicate 210.062420913056
Replicate 311.402096970604
Condition 2: 8 Hour
Replicate 111.455192771703
Replicate 29.749893495016
Replicate 312.458248769128
Condition 3: 24 Hour
Replicate 113.136450207182
Replicate 29.0348978581385
Replicate 312.696231812035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17549.p1 GENE.S_Transcript_17549~~S_Transcript_17549.p1 ORF type:3prime_partial len:296 (+),score=50.32,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|6.2e-05,PPR_1|PF12854.3|9.2,PPR|PF01535.16|5.7e+03,PPR|PF01535.16|0.019,PPR|PF01535.16|16,PPR|PF01535.16|0.013,PPR|PF01535.16|1.4e+02,PPR_2|PF13041.2|2.8e+03,PPR_2|PF13041.2|9.4e+03,PPR_2|PF13041.2|0.0004,PPR_2|PF13041.2|0.0012 S_Transcript_17549:269-1153(+)
ATGGGGGTGCCAATCATCATTAGAACACTAAAGACTCGATCTTCTCTTACCCCACTTATTTTCTCAACCAATTTTTCATCATTATCTTCCATGAAAATCCTTAATCTCCAAAACCCATCTATAATTCGTCAACAAATTAAAAACCCCTCTTCAGAATCTCGTGTTATTGTCACTTCCTTCAGGGATTGGTTCAAAACTGCTAACAACCCTTTACTTGAAAGGATTTTCCAGATTCTTAGTAATAATAAGGGTAATGTAGATCTAACCTTTTCTACTAGTGTTGATGTGGGTCTTTCTCAATTGGGCATTAGATTGTCTGATTCATTTGTTCTTCAAGTTCTTGATTATAGAAAAGATGATGTTTTGTCTTGCTTGAAATTCTTTGATTGGGCTGGTAGACAAACAGGGTTTCATCATTCTCGTGCTACTTTTATTGCTATCTTTAAGATTTTGTCTAGGGCTAAGCTTACTTCGTTAATGGTTGACTTGTTGGATACTTATGTTAAAGACAATCACTTTCATAAGGTTAGGTTTAATGATATTCTTGTCATTGGTTATGCTCTTGCTGGTAAAGTTGACATTGCCCTCCAAGTGTTTGGAAAAATGCGCTTTCATGGGATGGATTTAGATGTGGTTGCTTATCATGTCCTCGCTAATGCACTTGTCGAGGAGGGTTGTTTTGATGCTGTGAGTTCTGTGTTGGGTCAGATTCAGATGTTTGGGCATGAGAACGTGGTTACACATTCCATAACTATGAAGAGTTTGTGCAAGCAGGGTAAGCTGGATGAGGCGGAGGAGTACTTACGTGGGTTGTTGAGTAGGGAAAAGGTAGTTGTTTCAGGGCATGTGCTAGGTGTTCTCGTCGATGCCCTTTGTAAGAACGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17549.p1 GENE.S_Transcript_17549~~S_Transcript_17549.p1 ORF type:3prime_partial len:296 (+),score=50.32,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|6.2e-05,PPR_1|PF12854.3|9.2,PPR|PF01535.16|5.7e+03,PPR|PF01535.16|0.019,PPR|PF01535.16|16,PPR|PF01535.16|0.013,PPR|PF01535.16|1.4e+02,PPR_2|PF13041.2|2.8e+03,PPR_2|PF13041.2|9.4e+03,PPR_2|PF13041.2|0.0004,PPR_2|PF13041.2|0.0012 S_Transcript_17549:269-1153(+)
MGVPIIIRTLKTRSSLTPLIFSTNFSSLSSMKILNLQNPSIIRQQIKNPSSESRVIVTSFRDWFKTANNPLLERIFQILSNNKGNVDLTFSTSVDVGLSQLGIRLSDSFVLQVLDYRKDDVLSCLKFFDWAGRQTGFHHSRATFIAIFKILSRAKLTSLMVDLLDTYVKDNHFHKVRFNDILVIGYALAGKVDIALQVFGKMRFHGMDLDVVAYHVLANALVEEGCFDAVSSVLGQIQMFGHENVVTHSITMKSLCKQGKLDEAEEYLRGLLSREKVVVSGHVLGVLVDALCKNG

Click here to download the sequence:
Link to NCBI Protein BLAST