Transcript Information: S_Transcript_175603.p1


Annotated TAIR IDAT1G17970.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6185032-6187202 | Forward length=368
E-Value1.1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6943059792584
Replicate 21.1648056598688
Replicate 31.0023226132392
Condition 2: 8 Hour
Replicate 11.0596467238327
Replicate 21.2506002345189
Replicate 31.7211553966755
Condition 3: 24 Hour
Replicate 10.67841253076379
Replicate 21.2317288900189
Replicate 30.97911663063339


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_175603.p1 GENE.S_Transcript_175603~~S_Transcript_175603.p1 ORF type:complete len:644 (+),score=100.82,zf-RING_2|PF13639.2|1.3e+04,zf-RING_2|PF13639.2|5.8e+02,zf-RING_2|PF13639.2|4.8e-11,zf-RING_11|PF17123.1|6.5e+02,zf-RING_11|PF17123.1|8.6e-07 S_Transcript_175603:222-2153(+)
ATGGCACTGGTGCCAGATATTCAAGATATTGAGAGCTTTGGTGGTAGTTGTGATCAATCTAGCTCATGCTTGGATATCCAGAATCAGAGAAATGATCATGGTGCGGGAAAAGAGCAATCTTTGTCTTCTTCATTCCAGAAGGACGAATTCTATGAACAGATTGTCCCACAACTACAAGGGAGTGATCGCAATAAAAATCCCAACCTACCTGGGGACACAATTATGCAAATTTCTGGTGATAGTGCTCCTAGTCAGGGTCCAAATCTAATTTCAGATGACAATGGTAATGAGGCAGCCTCTGCTTTATCCCTGAGTATGTCCCGTTCAAGGGTATTGAAGGCTGAGCCAATATTGTCTATGCGTTTGCCCTCCGTCAGGATTAATAATTCTTCTTCAGGAGTGCCCAGCAATTTTAGGCCTCAGAATGGTGGTAATTCAAGACCGGTATTCAAATTTCGAAGTTCTAGTGGCCCTGGACAAGCGGATAGAATTACATTGAATAATCATTCCGGTCATTTCAATTCTGCTTCCTCCACTAGTCTATCTTTATCGCGTTCAAATCCACCTCACACGGATTTTCGGGAACATCGTGTTCTGAGAACTAGGGTTGGCCAGCATGCAAATTCTGACCTGCTTCCTACTCTACATACAAATATATCTACTGCAAGGCCTCAAGGAAATTGCTACTCAGGAATAAGCCAACATAACTATTTGCTGTTGAATTCATCTACAACTATGAATGTGCCAGTACAGCACTTTGGCCCCCATCAATCAGTCGGCCCTACGTGGTTGAATGAATTTTCTGTACATTCCAGCACTCCGTATATGCCTGGGATGATGCTTCCTCCTCATCTATCAAGAAACACACCTTCTTTGTCTCCAACTTTCCGGCCTAATTCAATGGCTGACATCTCAACACTAAGACAACAAGCACCTGAAATCAGAAATCTCTCTCAACAGTCCAGACCACCCAACCTAGCCTTTGAAAATTTTGGTTCTCTTGGTGATCTTTCTACTTACGAAATGGACTACTGGCCTGCTCTTCCCTGGGCTCAGCCCACCTACTCAGCCGTGAGGCAGCAGACAGCAGCAGAGCATCTTCCATGGTTTCTCTCTCCTTGGCATGGTTCACAGTCAGGAAGCCAATACTTTGAATTTGCTCCAAGGCTGCATCCTAATGCCTATGGATACCCTCCAGATTTATTGCTGCAGCCTGGACCTAGAGCTGTCGGCTACAGTCCATATTTTCACGGTCCACTGGTCTCCCAGTCTGGACATGATCTCCGGAGGCTTGGGGCCGTGCCCCTTACATCGCAGACTGTGGCAGCTCGAGCTGATGGACTGCAGAGGAGACCAAATGCTGCAGTGCTAAGGGAACTGGAAAATGAAACAATTTCTGAGGACCTCTCTTTTTATGGCAGATACCAACATCCAATGATGCGTTATTTTAATGAAAGATTTGGAGATATGAGAGATGATGTTTACGACACAATCCGGCATCCAATAATATATTATCTTGACGAAAGATTCAGAGATAGGAGACAAAATCTTGAGAACATGCTGCGTGAGGTAACTAAAAAGCCATATTATTTTCCTTGTCATAAGTTCTGTGGAGTAATTTCTTCTGAGATAGAATGCTTAATATGTACTCGGAGGCTCTCACAAGTTTCGGTCCGCATTAGGAGTGTGGGGAGGTCCGGATTGAGGGAGGAAACCATTATGGAGCTTTTGAGACGGAAAGTTTATGACCGTGGTACCAGTGAACCTTCTGCAGATCCAGAGGCATGTTGCATTTGTATAGGAGAATATGTTGCTGGAGAAGAAATTGGGACGTTAAATTGTGGTCACGAGTTCCACCCCGAATGTATCAAGCAGTGGCTGATGGTGAAGAATCAATGCCCATTCTGCAAGGCGAGAGGCTTGGATACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_175603.p1 GENE.S_Transcript_175603~~S_Transcript_175603.p1 ORF type:complete len:644 (+),score=100.82,zf-RING_2|PF13639.2|1.3e+04,zf-RING_2|PF13639.2|5.8e+02,zf-RING_2|PF13639.2|4.8e-11,zf-RING_11|PF17123.1|6.5e+02,zf-RING_11|PF17123.1|8.6e-07 S_Transcript_175603:222-2153(+)
MALVPDIQDIESFGGSCDQSSSCLDIQNQRNDHGAGKEQSLSSSFQKDEFYEQIVPQLQGSDRNKNPNLPGDTIMQISGDSAPSQGPNLISDDNGNEAASALSLSMSRSRVLKAEPILSMRLPSVRINNSSSGVPSNFRPQNGGNSRPVFKFRSSSGPGQADRITLNNHSGHFNSASSTSLSLSRSNPPHTDFREHRVLRTRVGQHANSDLLPTLHTNISTARPQGNCYSGISQHNYLLLNSSTTMNVPVQHFGPHQSVGPTWLNEFSVHSSTPYMPGMMLPPHLSRNTPSLSPTFRPNSMADISTLRQQAPEIRNLSQQSRPPNLAFENFGSLGDLSTYEMDYWPALPWAQPTYSAVRQQTAAEHLPWFLSPWHGSQSGSQYFEFAPRLHPNAYGYPPDLLLQPGPRAVGYSPYFHGPLVSQSGHDLRRLGAVPLTSQTVAARADGLQRRPNAAVLRELENETISEDLSFYGRYQHPMMRYFNERFGDMRDDVYDTIRHPIIYYLDERFRDRRQNLENMLREVTKKPYYFPCHKFCGVISSEIECLICTRRLSQVSVRIRSVGRSGLREETIMELLRRKVYDRGTSEPSADPEACCICIGEYVAGEEIGTLNCGHEFHPECIKQWLMVKNQCPFCKARGLDT*

Click here to download the sequence:
Link to NCBI Protein BLAST