Transcript Information: S_Transcript_175888.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value6.8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.976655356981
Replicate 23.2967386695137
Replicate 32.5438256667035
Condition 2: 8 Hour
Replicate 15.6377468654489
Replicate 25.4001013957961
Replicate 33.4301363962039
Condition 3: 24 Hour
Replicate 12.7619967631786
Replicate 22.8655393947106
Replicate 32.6091770074258


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_175888.p1 GENE.S_Transcript_175888~~S_Transcript_175888.p1 ORF type:5prime_partial len:87 (+),score=13.76 S_Transcript_175888:2-262(+)
GAAGATGCTGCCAACAAGTTTGCTCGTGGTCACTACACTAGGGCAGATATCCTCAAGCCAATTTGTATGCTTGTGGCTGGTCTCTTGGAGCTAATATTCTTGTTCATTACATTGCTGAGGGATCAGAGTAGATTAGAATATATTGGAGTTGGTAATCGGGGAGCTAGTGGTATTGACGGTTTGCTGAGCACAACTACTGGTTTTGATGTAGGATGCAAGAAAAGAGTAAGTGTTCACATTAAATATTTAGCAGACATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_175888.p1 GENE.S_Transcript_175888~~S_Transcript_175888.p1 ORF type:5prime_partial len:87 (+),score=13.76 S_Transcript_175888:2-262(+)
EDAANKFARGHYTRADILKPICMLVAGLLELIFLFITLLRDQSRLEYIGVGNRGASGIDGLLSTTTGFDVGCKKRVSVHIKYLADM*

Click here to download the sequence:
Link to NCBI Protein BLAST