Transcript Information: S_Transcript_175896.p1


Annotated TAIR IDAT5G45420.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18405668-18406597 | Reverse length=309
E-Value6.3E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.387146075879
Replicate 212.101105787607
Replicate 39.5008034370064
Condition 2: 8 Hour
Replicate 111.632031082072
Replicate 210.846956916231
Replicate 310.399549892127
Condition 3: 24 Hour
Replicate 19.7970992624483
Replicate 27.8293167263746
Replicate 38.9423611981775


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_175896.p1 GENE.S_Transcript_175896~~S_Transcript_175896.p1 ORF type:complete len:330 (+),score=92.53,Myb_DNA-binding|PF00249.27|0.00039,Myb_DNA-binding|PF00249.27|0.00021 S_Transcript_175896:65-1054(+)
ATGGAGTTTCTTGACGAGTACGATGAGGGCAGACCCAGATTCATCTTCCAATCTCGCCCATCACCCTCATCTTCAATCCCTGATTCACCTGAAAATTCCCAGAGAAACAAGCCATTGATCTTCATTTCCCTCACATTCTCTCTCCTTTTCCTGGCATTTTCCCTCTTTTTCATTAAATCCCAACTCCTCCAATCTCTTACAATCTGGTTCTCCCTTTCTCTCCTCGTGGGCCCCTTTGCCCCTCTTTCTCTCACAGGTGGAAACATTCGGGTCGGTCAAGGAAAGATAGTTGAATTCCCCCCTCAAACGGAATCACCTGATGTTGATGAATCCAAGAAAAAAGCACCCAATAAGAGGAACAGGGCAAAAAGATCGGATCTTGAAGGGTATACCCCTAATGGTTCATTGAATTCTGAGAAAACTAGTGAAAAGATTGGATCTTTCGAGGGTTCTGGGAGTGATTCTAAGGAAAAGGCAAAAGGGATTTTGAATTCTAGGGTTAATGATGATGGGATTGTGAATAAAGTGGAAAAAGAATGGAGTGAAGATGAATTGGATTTGTTGAGAAAACTAGCGGTGAAACACCCAGTTGGAAAGCCAAGGAGATGGGAGGTTATAGCTGAGAGTTTTGAGGGTAGACATAGTGTAGAGAGTGTGATCAACATGGCTAAGTCATTAGGGAAGGAGAAGCCAGATGATTCGGATTCATATTCGAAGTTCTTGAAGGATCGAAAACCGGTGGATAAGAGGGTAGAGGGTGACTTGGGCAATGTAGAAACTGGTGGCGATGGTGGGGAAAGGGTGGTTAGTTGGAGTTCAAGTGAAGATATTGGATTACTTAATGCATTGAAAGCATTTCCAAAGGATGTGGCAATGAGATGGGACAAGATTACTGCTGCTGTTCCTGGGAAGTCGAAGGCTGCTTGTATGAAACGAGTTGCTGAGCTTAAGAAGGAGTTTAGGAGCTCTAAAGCTTCCAATGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_175896.p1 GENE.S_Transcript_175896~~S_Transcript_175896.p1 ORF type:complete len:330 (+),score=92.53,Myb_DNA-binding|PF00249.27|0.00039,Myb_DNA-binding|PF00249.27|0.00021 S_Transcript_175896:65-1054(+)
MEFLDEYDEGRPRFIFQSRPSPSSSIPDSPENSQRNKPLIFISLTFSLLFLAFSLFFIKSQLLQSLTIWFSLSLLVGPFAPLSLTGGNIRVGQGKIVEFPPQTESPDVDESKKKAPNKRNRAKRSDLEGYTPNGSLNSEKTSEKIGSFEGSGSDSKEKAKGILNSRVNDDGIVNKVEKEWSEDELDLLRKLAVKHPVGKPRRWEVIAESFEGRHSVESVINMAKSLGKEKPDDSDSYSKFLKDRKPVDKRVEGDLGNVETGGDGGERVVSWSSSEDIGLLNALKAFPKDVAMRWDKITAAVPGKSKAACMKRVAELKKEFRSSKASNES*

Click here to download the sequence:
Link to NCBI Protein BLAST