Transcript Information: S_Transcript_176076.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85161603952578
Replicate 20.82367747681389
Replicate 31.0327932206816
Condition 2: 8 Hour
Replicate 11.2510895652718
Replicate 20.95453220862833
Replicate 30.7957916439193
Condition 3: 24 Hour
Replicate 11.0485544075485
Replicate 21.0878629556647
Replicate 31.2106581314456


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176076.p1 GENE.S_Transcript_176076~~S_Transcript_176076.p1 ORF type:complete len:375 (+),score=41.75,RVT_1|PF00078.23|3.9e-17 S_Transcript_176076:558-1682(+)
ATGCTTGACCCAGACTTTCCCCCTCTCTTGCAAAATTTGTGGGGCCATGACAAGAACCCAATGGCTAATCTCTCCGCAATTGCCAATCCTATCAAGAACTGGGCTAAAGATAAATTCGGTAACTTGAGTGTGAGAAAGAGGAAGCTTTTTGCTAGTCTTCATGGTATCCAAAAGGACATTTGTCTGTACTCCAACAATGCATACTTGTTTGAACTTGAAAAGATGCTTACTACTGAATTGGAGGGGATCCTTGACCATGAGCAGTCTTATTGGCTTATTAGGTCTAGACAAAACTGGTTGACCCAAGAAGACAGGAACACTGCCTATTTCCATAAATCTGTCATCTTTAGAAGGCATTCCAATAAAATCCTCTCTCTTAGAAACTCAGTGGGTGAGGTCATCAGTGAACCCCAACTTCTTTGTGATCACATCAAGTCACATTTCAAATCTCTGTTGTCCTCTGAAAAGCCTTTCACTTGGAACCACCCCCAATGGTTATTCCCTGTCAATAGTAACACCATCTCCATAGCCAAGAGACCTAGTCCCTCCGAGGTTAAGGATGTTGTTTTTTCTCAAGGGGGCTGCAAGGCCTCAAGGCTAGATGGGTTTCATGTTGTCTTCTACCAGAGATTTTGGGATCTCCTTGGTCCGGATCTCATATATTCCACGGCCGCCCTCTTTGCCTCTGCTTCTTTTCCCAGTGGCTTCAACCAAACCTTGATTAGCCTTATTCCTAAATGCCCCAACCCTAAGACGATTAAGCAACTTAGGCCCATTAGCTTGTGTGACACAAACTACAAAATCATCTCAAAGATTCTGGTGAGTAGAATAAGACCTCTCCTTAGAGATCTCATTTCACCCAATCAAAATAGCTTCATTCCAGGCAGGGGATCTGAAATCAACTACATTATAGCCTCCGAAATCCTATACACCATAGGTAAGAAAAAAGGGTGGAAGGGTTGGTTTGCTTTGAAACTTGATCTTGAAAAGGTCTATGATAGAATGGAATGGGACTTTATTACAAATTTGCTCTTTACCTTCAATTTTGACTCCTATTCCATTAAGTTGATCATGGAATGCATCACTCTGTCTCTACCTTTGTCTTGGTTAATGGGGGGCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176076.p1 GENE.S_Transcript_176076~~S_Transcript_176076.p1 ORF type:complete len:375 (+),score=41.75,RVT_1|PF00078.23|3.9e-17 S_Transcript_176076:558-1682(+)
MLDPDFPPLLQNLWGHDKNPMANLSAIANPIKNWAKDKFGNLSVRKRKLFASLHGIQKDICLYSNNAYLFELEKMLTTELEGILDHEQSYWLIRSRQNWLTQEDRNTAYFHKSVIFRRHSNKILSLRNSVGEVISEPQLLCDHIKSHFKSLLSSEKPFTWNHPQWLFPVNSNTISIAKRPSPSEVKDVVFSQGGCKASRLDGFHVVFYQRFWDLLGPDLIYSTAALFASASFPSGFNQTLISLIPKCPNPKTIKQLRPISLCDTNYKIISKILVSRIRPLLRDLISPNQNSFIPGRGSEINYIIASEILYTIGKKKGWKGWFALKLDLEKVYDRMEWDFITNLLFTFNFDSYSIKLIMECITLSLPLSWLMGGH*

Click here to download the sequence:
Link to NCBI Protein BLAST