Transcript Information: S_Transcript_176122.p1


Annotated TAIR IDAT5G28950.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10992505-10993435 | Forward length=148
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96191570729568
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.25693241345943
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176122.p1 GENE.S_Transcript_176122~~S_Transcript_176122.p1 ORF type:5prime_partial len:83 (+),score=1.25,DDE_Tnp_4|PF13359.2|2.8e-06 S_Transcript_176122:2-250(+)
AAAATGATACCAACTACCAACGTTTTAGCAGCATGTGACTTTGATTTGCTATTCACATATGTTTTAACGGGATGGGAAGGATCAACACATGATACACGCATTTTCCTAGACACAATCAACAATCTAAGTCTCAAATTTCCAAAACCGCCGGCAAGTAATTACTTCAATGTCATTTATTATAAATTGGGTTTAAATTTTCTTGAAAGCATATTTGAAACATCATCTAAAATCACTTCTACTCAATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176122.p1 GENE.S_Transcript_176122~~S_Transcript_176122.p1 ORF type:5prime_partial len:83 (+),score=1.25,DDE_Tnp_4|PF13359.2|2.8e-06 S_Transcript_176122:2-250(+)
KMIPTTNVLAACDFDLLFTYVLTGWEGSTHDTRIFLDTINNLSLKFPKPPASNYFNVIYYKLGLNFLESIFETSSKITSTQL*

Click here to download the sequence:
Link to NCBI Protein BLAST