Transcript Information: S_Transcript_17617.p1


Annotated TAIR IDAT1G08550.1
Annotated Gene Namenon-photochemical quenching 1
Annotated Gene Symbol(s)NPQ1, AVDE1
Annotation TypeOrtholog
Chromosome Positionchr1:2707462-2709387 | Forward length=462
E-Value3.5E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.683378854711
Replicate 250.503473312598
Replicate 354.617353326808
Condition 2: 8 Hour
Replicate 149.86579491715
Replicate 248.863566622101
Replicate 351.806182080629
Condition 3: 24 Hour
Replicate 146.028619603308
Replicate 245.812929610432
Replicate 343.368954298305


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17617.p1 GENE.S_Transcript_17617~~S_Transcript_17617.p1 ORF type:complete len:467 (+),score=98.95,VDE|PF07137.7|2.8e+03,VDE|PF07137.7|4.4e-125 S_Transcript_17617:513-1913(+)
ATGGCGTTAGTTGCACGATCGATATCCTTGTCCTATGATGATAATATTGGTCTGTGCAATATTTCACAGAAAAGATTTACTAAATGGTTCCAATGGAGGAACCCATTTCAATTCCAAGATGTAGTTAGAATGAGGTATAATGGGAGAAAGTTATCATATGGAAAGCTCCATGGAAGACCCCAGAGTTTATTTTATAGTCCAAAGTCTGGAAATTTGAGATGGATTTCATGTGGACTGGAGGTGAATACCTCAGAGATTGCCTCCAATCTTGTCGCATCTGAGAAGTGGAGACCATTTAAGTTGCAGTTTCTGAAAGTGACGGCTGCCGTGGCATGCACCTTTTTGGTCATGTCTTCTGCAGAAGCTGTTGACGCCCTTAAAACGTGTACTTGCTTATTGAAGGAGTGCAGAATAGAACTTGCCAAGTGCATTGCAAATCCTTCATGTGCTGCCAATGTAGCCTGTTTGCAGACCTGCAATGATAGGCCTGATGAAACTGAGTGTCAGATCAAGTGTGGAGACTTGTTTGAGAACAAGGTTGTGGATGAGTTCAATGAATGTGCGGTCTCTAGAAAGAAATGCGTGCCTCGAAAATCTGATGTTGGAGAGTTTCCTGTTCCTGATCCTGGTGTTCTTGTTCAGAGGTTCAACCTAGCGGATTTCAGTGGGAAATGGTTTATAAGTAGCGGCCTGAACCCTACATTTGACACCTTTGATTGCCAATTACATGAGTTCCATGTCGAAGATGGCAAGCTTGTGGGAAATTTATCCTGGCGAATCAAAACACCAGATGGTGGATTTTTCACTCGATCTGCTGTGCAGAGATTTGTGCAGGATCCTAATCAACCCGGGATACTGTACAATCATGATAATGAGTATCTTCACTATCAAGATGATTGGTACATTCTATCATCTAAGATAGAAAATCAGCCGGATGATTACATATATGTTTATTATCGGGGTAGAAATGATGCCTGGGATGGCTATGGTGGTGCTGTTATATACACAAGAAGTTCAGTTTTGCCGGACAATATTGTTCCTGAGCTTCAAAGAGCATCTCAGAGTGTAGGACGAGATTTCAACAAATTCATCCGCACAGACAATACTTGTGGGCCCGGGCCTCCACTTGTTGAGAGGCTGGAGAAGAAGGTGGAGGAAGGAGAGAGAACCATCATAAGGGAAGTTGAGGAGTTAGAAGGAGAAGTGGAGAAGGTTGGGAGGACTGAGATTTCACTATTTAAGAGGCTTGCAGACGGGTTTAAAGAGCTTCGGAAGGATGAAGAGAACTTCCTCAGAGGATTAAGTAAGGAGGAGATGGAACTTTTAAGCGAATTAAAGATGGAAGCCAGCGAGGTGGAAAAACTCTTTGGGCAAGCACTTCCCCTCAGAAAACTTCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17617.p1 GENE.S_Transcript_17617~~S_Transcript_17617.p1 ORF type:complete len:467 (+),score=98.95,VDE|PF07137.7|2.8e+03,VDE|PF07137.7|4.4e-125 S_Transcript_17617:513-1913(+)
MALVARSISLSYDDNIGLCNISQKRFTKWFQWRNPFQFQDVVRMRYNGRKLSYGKLHGRPQSLFYSPKSGNLRWISCGLEVNTSEIASNLVASEKWRPFKLQFLKVTAAVACTFLVMSSAEAVDALKTCTCLLKECRIELAKCIANPSCAANVACLQTCNDRPDETECQIKCGDLFENKVVDEFNECAVSRKKCVPRKSDVGEFPVPDPGVLVQRFNLADFSGKWFISSGLNPTFDTFDCQLHEFHVEDGKLVGNLSWRIKTPDGGFFTRSAVQRFVQDPNQPGILYNHDNEYLHYQDDWYILSSKIENQPDDYIYVYYRGRNDAWDGYGGAVIYTRSSVLPDNIVPELQRASQSVGRDFNKFIRTDNTCGPGPPLVERLEKKVEEGERTIIREVEELEGEVEKVGRTEISLFKRLADGFKELRKDEENFLRGLSKEEMELLSELKMEASEVEKLFGQALPLRKLR*

Click here to download the sequence:
Link to NCBI Protein BLAST