Transcript Information: S_Transcript_17618.p2


Annotated TAIR IDAT1G08550.1
Annotated Gene Namenon-photochemical quenching 1
Annotated Gene Symbol(s)NPQ1, AVDE1
Annotation TypeOrtholog
Chromosome Positionchr1:2707462-2709387 | Forward length=462
E-Value2.1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2450186019306
Replicate 24.3313451892054
Replicate 33.2812229841989
Condition 2: 8 Hour
Replicate 13.0091041551783
Replicate 22.8822627081856
Replicate 32.4846693527279
Condition 3: 24 Hour
Replicate 11.6082122815161
Replicate 22.3637104098031
Replicate 31.0831552812013


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17618.p2 GENE.S_Transcript_17618~~S_Transcript_17618.p2 ORF type:complete len:163 (-),score=13.85 S_Transcript_17618:3039-3527(-)
ATGCGAACACAGAAATCGAGAGATGGGGGGCTCTCTTGTGAAAAATTACTTGCAACTAACAATCACCTCATGTGTAGGTTCTCTATGCCATATTCTGAGGTGCTCTTGACCAAATCTTCTTTGACATGTTTCCTTGAATCCCAATCCTATCGAAGTTTTCTGAGGGGAAGTGCTTGCCCAAAGAGTTTTTCCACCTCGCTGGCTTCCATCTTTAATTCGCTTAAAAGTTCCATCTCCTCCTTACTTAATCCTCTGAGGAAGTTCTCTTCATCCTTCCGAAGCTCTTTAAACCCGTCTGCAAGCCTCTTAAATAGTGAAATCTCAGTCCTCCCAACCTTCTCCACTTCTCCTTCTAACTCCTCAACTTCCCTTATGATGGTTCTCTCTCCTTCCTCCACCTTCTTCTCCAGCCTCTCAACAAGTGGAGGCCCGGGCCCACAAGTATTGTCTGTGCGGATGAATTTGTTGAAATCTCGTCCTACACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17618.p2 GENE.S_Transcript_17618~~S_Transcript_17618.p2 ORF type:complete len:163 (-),score=13.85 S_Transcript_17618:3039-3527(-)
MRTQKSRDGGLSCEKLLATNNHLMCRFSMPYSEVLLTKSSLTCFLESQSYRSFLRGSACPKSFSTSLASIFNSLKSSISSLLNPLRKFSSSFRSSLNPSASLLNSEISVLPTFSTSPSNSSTSLMMVLSPSSTFFSSLSTSGGPGPQVLSVRMNLLKSRPTL*

Click here to download the sequence:
Link to NCBI Protein BLAST