Transcript Information: S_Transcript_176183.p1


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value1.4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0862449483747
Replicate 22.8516530720597
Replicate 32.5092157936871
Condition 2: 8 Hour
Replicate 14.6422618377432
Replicate 23.0437889305751
Replicate 31.3050518941825
Condition 3: 24 Hour
Replicate 13.715116239897
Replicate 22.0042826564117
Replicate 31.5442068003132


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176183.p1 GENE.S_Transcript_176183~~S_Transcript_176183.p1 ORF type:5prime_partial len:147 (-),score=20.14 S_Transcript_176183:511-951(-)
GCAGGAAAATTTGCTGTGTGGATGCTCCCTCAACTCTTTGCCTATGCTTTGAATTTCCCTATACAAAAATTCTTGCAATCGCAGCGGAAAGTGTTTGTGATGGCCTTGGTCTCTGCCATTGTGCTGGTGATACACACAGTGTTGAGCTGGCTGTTTATGCTTAAGCTTGGATGGGGCTTGGCAGGAGCAGCCATCATGCTTAACACCTCTTGGTGGCTTATTATCATTCTGCAACTTCTCTATATTTTCATCACAAACTCGGATGGTGCTTGGTGTGGATTTTCCTGGCTGGCATTCAGTGACTTGTGGGGCTTTGTGCAGCTCTCGCTGGCATCTGCTGTAATGTTGTGGTATCTCACTCGTCCCTCTGACTGCCTCTCTCTGTCTTTTGAAGCTCATTTCCTATTTATTTCCTTGCACAAATTTCTATCAAATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176183.p1 GENE.S_Transcript_176183~~S_Transcript_176183.p1 ORF type:5prime_partial len:147 (-),score=20.14 S_Transcript_176183:511-951(-)
AGKFAVWMLPQLFAYALNFPIQKFLQSQRKVFVMALVSAIVLVIHTVLSWLFMLKLGWGLAGAAIMLNTSWWLIIILQLLYIFITNSDGAWCGFSWLAFSDLWGFVQLSLASAVMLWYLTRPSDCLSLSFEAHFLFISLHKFLSNF*

Click here to download the sequence:
Link to NCBI Protein BLAST