Transcript Information: S_Transcript_176258.p1


Annotated TAIR IDAT4G13650.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7939611-7942898 | Reverse length=1064
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19009286596558
Replicate 20.15759135398225
Replicate 30.39520148750573
Condition 2: 8 Hour
Replicate 11.6755663820605
Replicate 20.95879351313114
Replicate 31.2180484345704
Condition 3: 24 Hour
Replicate 11.7163837028324
Replicate 20.64753747360992
Replicate 31.2611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176258.p1 GENE.S_Transcript_176258~~S_Transcript_176258.p1 ORF type:complete len:140 (+),score=25.38,PPR_2|PF13041.2|17,PPR_2|PF13041.2|8.1e-09,PPR_2|PF13041.2|49,PPR|PF01535.16|5.4,PPR|PF01535.16|0.025,PPR|PF01535.16|6.6 S_Transcript_176258:336-755(+)
ATGGTAAAAAAGGTTCATGGGTCAATTTTGAAATTGGGTTTTACTGGAGAAACAGGTTCATGTAACCAGTTAATAGATTTCTATATTGATGCACATAAGGTGTTTGATGAAATGCTTCAGAGATGTGTCAGTGTATGTATTTCTTCGTGGAATCGTATTTTGTCTGGCCTTGCTAATAAGAAACAGTCAATGGAAGCATTACAATTGTTTTCACAGATACTTATTGAAAATGTGGCTCCTGATGAATATACATTTGCCAGTGTATTGAAGGCATGTGGTGGTGATGCAGGGCAAAAGATTTGGTTTCGCAGCATTGAGCAAATTCATGCTAAGATTGTTCAATATGGCTTTGATGATAGCAGGTTTGTGTGTAATCCATTGATTGACTGGTACTCGAAAAATGGATTCATAGATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176258.p1 GENE.S_Transcript_176258~~S_Transcript_176258.p1 ORF type:complete len:140 (+),score=25.38,PPR_2|PF13041.2|17,PPR_2|PF13041.2|8.1e-09,PPR_2|PF13041.2|49,PPR|PF01535.16|5.4,PPR|PF01535.16|0.025,PPR|PF01535.16|6.6 S_Transcript_176258:336-755(+)
MVKKVHGSILKLGFTGETGSCNQLIDFYIDAHKVFDEMLQRCVSVCISSWNRILSGLANKKQSMEALQLFSQILIENVAPDEYTFASVLKACGGDAGQKIWFRSIEQIHAKIVQYGFDDSRFVCNPLIDWYSKNGFIDF*

Click here to download the sequence:
Link to NCBI Protein BLAST