Transcript Information: S_Transcript_176280.p1


Annotated TAIR IDAT2G39650.1
Annotated Gene NameProtein of unknown function (DUF506)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16528094-16529274 | Reverse length=291
E-Value3.9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7965510846769
Replicate 210.725910000269
Replicate 39.3632352424434
Condition 2: 8 Hour
Replicate 110.629886865771
Replicate 211.358015463246
Replicate 314.560363594787
Condition 3: 24 Hour
Replicate 18.2002331872384
Replicate 25.6485191928743
Replicate 37.6054164667735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176280.p1 GENE.S_Transcript_176280~~S_Transcript_176280.p1 ORF type:5prime_partial len:325 (+),score=62.95,PDDEXK_6|PF04720.8|5e-61 S_Transcript_176280:3-977(+)
AGGGTATTCCCGGCGGCGGTGGAGGACGGCGGTGGCGTCGACGAAGGAGGAGAGATGGATTGCAGAGTATGCAGAGCTGCCGGAGATATATGGAAGAGAGCTTATGGTTATAATTATGGTGAGCAGTTGAGCCTTGAAAGCGAGAATGACTTAGCGGATATGGTTAGCGACTTTCTGGAGAACGGAAGTGGAGGTGCTAATCGTTCTCGTTGTAGCAGTGATAGCGACTCTGGTTTATCCGATCTTAGTCGCCTCGCTGACAAGATTTCGTTCTTTAAGCGCTCGGTGGATCAGTATGAGAGTGACTTGCTGTCTGTAGTTCAGTCTCATGTGCTTTCTATGGGCGATGCAAACCTTCAGTTGGTTAAGCCTGGTCTTTGCAATGGTAGCTGCATCCGTTACTCTTTAGTCAAACTTCTCAGATCTGCTGGCTATGATGCGGCGGTGTGCGAGTCTAAGTGGCAAGGCTGTAACAAGGTGCCTGGAGGTGATCATGAATATGTTGATGTGGTGAATTACAATAATGATGGTGGCTCTGAGAGATTGATAATTGATATTGACTTCCGAAGCCACTTTGAAATAGCAAGAGTTGTGGAGCCATATGACAAGATTTTGAAATCTCTTCCAGTGATCTTTGTTGGCTCCTTAACAAAGCTAAAACAGTTCCTACAAGTAATGGCTGAAGCTTCCAGGGTGAATCTGAAGCAGAATAAGATGCCTCTTCCTCCTTGGAGGTCTCTGGCTTATTTACAAGCTAAGTGGCATTCTCCTTACCAGAGAAAGGTGACCCCAGAAAAACAGAATATCAGTAGAGCTGTTGCCAACGGCCATAAACAGTGCAATGGTCATTTGAAGAGGTTGCAGTCTTCTCTGCAGTCTCAGATTGAGACTGAGGGGTTACTGAAGCCCATCAATAACGGCAGAAGGCTGAAACTTGAAAGGAGGAAGAAAAGCTCTTCTTTCAGGAAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176280.p1 GENE.S_Transcript_176280~~S_Transcript_176280.p1 ORF type:5prime_partial len:325 (+),score=62.95,PDDEXK_6|PF04720.8|5e-61 S_Transcript_176280:3-977(+)
RVFPAAVEDGGGVDEGGEMDCRVCRAAGDIWKRAYGYNYGEQLSLESENDLADMVSDFLENGSGGANRSRCSSDSDSGLSDLSRLADKISFFKRSVDQYESDLLSVVQSHVLSMGDANLQLVKPGLCNGSCIRYSLVKLLRSAGYDAAVCESKWQGCNKVPGGDHEYVDVVNYNNDGGSERLIIDIDFRSHFEIARVVEPYDKILKSLPVIFVGSLTKLKQFLQVMAEASRVNLKQNKMPLPPWRSLAYLQAKWHSPYQRKVTPEKQNISRAVANGHKQCNGHLKRLQSSLQSQIETEGLLKPINNGRRLKLERRKKSSSFRKL*

Click here to download the sequence:
Link to NCBI Protein BLAST