Transcript Information: S_Transcript_176314.p1


Annotated TAIR IDAT4G00170.1
Annotated Gene NamePlant VAMP (vesicle-associated membrane protein) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:70732-72085 | Reverse length=239
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78853336993127
Replicate 20.65371228318562
Replicate 30.68306429939261
Condition 2: 8 Hour
Replicate 11.8955902504118
Replicate 21.3257391786505
Replicate 31.5789516744431
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.16788008575072
Replicate 30.37365991711283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176314.p1 GENE.S_Transcript_176314~~S_Transcript_176314.p1 ORF type:5prime_partial len:135 (-),score=16.47,Noggin|PF05806.8|8.4e-07 S_Transcript_176314:44-448(-)
CAGAAGTTGAGGGTTGTTTATGTCACTGCTAATCCCCCGTCTCCTATACCCGAAGGATCAGAAGAAGAGTATTCCCCTCAAGCATCTGAGCTCGAAAATGCTGAGCTCAGAAATCGTCTAATCAACTTTTTTGATTCCGCATTGGTGAGTACAAGCGAATGCCAAGATCAGTTTTCAGAGGAAACCAAAACAGAAAACGAAAATGAGGACCAAGTATCCCCGGACTGGGATACAGTTTCGAAGTTGATTGAGGAGCTAACCTTAGTAATTCTACAAAACCAAGATCTGCGACATGAATTGGAGATCAAAAGGAAACGAGCCAAGAGGATATGGAGTTCCCACTCAATTTTAGTTGCACTCTTGGCCTGTTTTATGGGGCTTGTAGTCGGGTATGTGATAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176314.p1 GENE.S_Transcript_176314~~S_Transcript_176314.p1 ORF type:5prime_partial len:135 (-),score=16.47,Noggin|PF05806.8|8.4e-07 S_Transcript_176314:44-448(-)
QKLRVVYVTANPPSPIPEGSEEEYSPQASELENAELRNRLINFFDSALVSTSECQDQFSEETKTENENEDQVSPDWDTVSKLIEELTLVILQNQDLRHELEIKRKRAKRIWSSHSILVALLACFMGLVVGYVIK*

Click here to download the sequence:
Link to NCBI Protein BLAST