Transcript Information: S_Transcript_176386.p1


Annotated TAIR IDAT5G63860.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)UVR8
Annotation TypeOrtholog
Chromosome Positionchr5:25554821-25558587 | Reverse length=440
E-Value5.7E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.532792758886
Replicate 223.492785176983
Replicate 323.138803141925
Condition 2: 8 Hour
Replicate 125.570722648784
Replicate 223.096862253051
Replicate 321.118478645676
Condition 3: 24 Hour
Replicate 125.384563685829
Replicate 228.22483941684
Replicate 325.105275681018


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176386.p1 GENE.S_Transcript_176386~~S_Transcript_176386.p1 ORF type:3prime_partial len:216 (+),score=43.46,RCC1|PF00415.14|3.8,RCC1|PF00415.14|4e-15,RCC1|PF00415.14|1.6e-16,RCC1|PF00415.14|7.8e-16,RCC1|PF00415.14|5.8e-06,RCC1_2|PF13540.2|3.4e-06,RCC1_2|PF13540.2|0.0051,RCC1_2|PF13540.2|1e-07,RCC1_2|PF13540.2|1.6e-07 S_Transcript_176386:442-1086(+)
ATGGAGATTGAGGAACAATCTAAGAATTCCGAACAGGGTGTTCGTCATATCCTTCTTATCTCTGCTGGTGCTAGCCACTCTGTTGCGCTTCTCTCTGGAAATCTGGTTTGCTCTTGGGGAAGAGGAGAGGATGGACAATTAGGCCATGGAGACGCTGAAGATCGTTTTTCTCCTGTGCAAGTGAGTTCCCTGGATGGACATGAAGTTAACTCCATTACTTGTGGAGCTGATCATACCCTTGCATACTCTGAGCCGCGTTTGCAGGTCTACAGTTGGGGATGGGGAGATTTTGGGCGGTTGGGTCACGGAAACTCTAGCGATTTGCTTATTCCTCAGCCAATCAGATTCTTTGACGGTGTGAAGATTAAACAAATTGCCTGTGGTGACAGCCACTGTCTGGCAGTCACTATGGACGGGGGTGTAGCAAGTTGGGGAAGAAATCAAAATGGCCAGCTTGGTCTCGGAACCGCTGAGGATTCTCTTGTTCCCCAAAAAATTCAAGCACTACAGGGAATATCTGTGACAATGGTAGCCGCTGGTGCTGAACATAGTGCTGCTGTTACGGAAGCTGGTGAGCTGTATGGCTGGGGATGGGGCCAATATGGAAATTTGGGCTTAGGTGACAGAAAAGATCGCCTAGTTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176386.p1 GENE.S_Transcript_176386~~S_Transcript_176386.p1 ORF type:3prime_partial len:216 (+),score=43.46,RCC1|PF00415.14|3.8,RCC1|PF00415.14|4e-15,RCC1|PF00415.14|1.6e-16,RCC1|PF00415.14|7.8e-16,RCC1|PF00415.14|5.8e-06,RCC1_2|PF13540.2|3.4e-06,RCC1_2|PF13540.2|0.0051,RCC1_2|PF13540.2|1e-07,RCC1_2|PF13540.2|1.6e-07 S_Transcript_176386:442-1086(+)
MEIEEQSKNSEQGVRHILLISAGASHSVALLSGNLVCSWGRGEDGQLGHGDAEDRFSPVQVSSLDGHEVNSITCGADHTLAYSEPRLQVYSWGWGDFGRLGHGNSSDLLIPQPIRFFDGVKIKQIACGDSHCLAVTMDGGVASWGRNQNGQLGLGTAEDSLVPQKIQALQGISVTMVAAGAEHSAAVTEAGELYGWGWGQYGNLGLGDRKDRLVP

Click here to download the sequence:
Link to NCBI Protein BLAST