Transcript Information: S_Transcript_176389.p1


Annotated TAIR IDAT5G63860.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)UVR8
Annotation TypeOrtholog
Chromosome Positionchr5:25554821-25558587 | Reverse length=440
E-Value2.4E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.561828514295
Replicate 263.089662274017
Replicate 356.053484388921
Condition 2: 8 Hour
Replicate 160.861226298335
Replicate 252.850350297781
Replicate 350.774828002877
Condition 3: 24 Hour
Replicate 156.391707662517
Replicate 255.449943491569
Replicate 359.65438592446


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176389.p1 GENE.S_Transcript_176389~~S_Transcript_176389.p1 ORF type:5prime_partial len:356 (-),score=74.94,RCC1|PF00415.14|1.5e-07,RCC1|PF00415.14|5.4e-15,RCC1|PF00415.14|1.2e-14,RCC1|PF00415.14|3.5e-12,RCC1|PF00415.14|2.8e-15,RCC1|PF00415.14|3.3e-07,RCC1_2|PF13540.2|2.1e-07,RCC1_2|PF13540.2|4.7e-07,RCC1_2|PF13540.2|2.3e-05,RCC1_2|PF13540.2|1.7e-09,RCC1_2|PF13540.2|1.5e-09 S_Transcript_176389:265-1332(-)
GGGAGGTTGGGTCATGGAAACTCCAGCGATTTGTTTATTCCTCAGTCAATCGGATTCTTTGACGGTGTGAAGATTAAACAAATTGCCTGTGGTGACAGCCACTGTCTGGCAGTCACTATGGACGGGGGTGTAGCAAGTTGGGGAAGAAATCAAAATGGCCAGCTTGGTCTCGGAACCACTGAGGATTCTCTTTTTCCCCAAAAAATTCAAGCACTACAGGGAATATCTGTGGCAATGGTAGCCGCTGGTGCTGAACATAGTGCTGCTGTTACGGAAGCTGGTGAGCTGTATGGCTGGGGATGGGGCCGATATGGAAATTTGGGCTTAGGTGACAGAAAAGATCGCCTAGTTCCTGAGAAAGTGGCATCAATTGATGGGACAAAAATGGTTCTTGTGGCGTGTGGATGGAGGCATACAATATCTGTAACTACTACTGGTTGTATATACACTTATGGATGGAGTAAATATGGCCAATTGGGGCATGGTGATTTTGAAGATCACCTGATTCCTCATAAATTGGAAGCTCTTGGTGACAAGATCATTTCTCAGATATCAGGTGGTTGGAGACACACCATGGCAGTCACATCTGATGGAGTACTGTATGGCTGGGGATGGAATAAGTTTGGACAGTTAGGCGTGGGTGACTATGTTGACCGCTGTTCTCCTGTGCAAGTTCTGTTTCCTCATGATCAAAAAGTAGTGCAAATATGTTGCGGATGGAGGCATACATTGGCTGTTACTGAGAGGAACAATGTTTTTTCTTGGGGAAGAGGCACAAATGGACAACTTGGGCATGGAGACTCTATTGACAGAAATTCACCAAAGATTATAGATGTTTTGAGCATGGATGGTGCGACTGGTAAAAAGATAGAACCCTCCAAAGCCGATCCATCAGCAGGGAAAATCTTGGTTCCACCTTCAGACAGATATGCTGTTGTCCCTGATGAAATGGTGCCAGGTCCAACAGCAGTCCCAAACACGGACAACGGTGGTGATGCCAGTGTGCCAGAGAATGACGTCAAACGGATACGTACAGATGGTGGGCCGTCTGGAAGAATCAGTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176389.p1 GENE.S_Transcript_176389~~S_Transcript_176389.p1 ORF type:5prime_partial len:356 (-),score=74.94,RCC1|PF00415.14|1.5e-07,RCC1|PF00415.14|5.4e-15,RCC1|PF00415.14|1.2e-14,RCC1|PF00415.14|3.5e-12,RCC1|PF00415.14|2.8e-15,RCC1|PF00415.14|3.3e-07,RCC1_2|PF13540.2|2.1e-07,RCC1_2|PF13540.2|4.7e-07,RCC1_2|PF13540.2|2.3e-05,RCC1_2|PF13540.2|1.7e-09,RCC1_2|PF13540.2|1.5e-09 S_Transcript_176389:265-1332(-)
GRLGHGNSSDLFIPQSIGFFDGVKIKQIACGDSHCLAVTMDGGVASWGRNQNGQLGLGTTEDSLFPQKIQALQGISVAMVAAGAEHSAAVTEAGELYGWGWGRYGNLGLGDRKDRLVPEKVASIDGTKMVLVACGWRHTISVTTTGCIYTYGWSKYGQLGHGDFEDHLIPHKLEALGDKIISQISGGWRHTMAVTSDGVLYGWGWNKFGQLGVGDYVDRCSPVQVLFPHDQKVVQICCGWRHTLAVTERNNVFSWGRGTNGQLGHGDSIDRNSPKIIDVLSMDGATGKKIEPSKADPSAGKILVPPSDRYAVVPDEMVPGPTAVPNTDNGGDASVPENDVKRIRTDGGPSGRISA*

Click here to download the sequence:
Link to NCBI Protein BLAST