Transcript Information: S_Transcript_176432.p1


Annotated TAIR IDAT4G36020.1
Annotated Gene Namecold shock domain protein 1
Annotated Gene Symbol(s)CSDP1
Annotation TypeHomolog
Chromosome Positionchr4:17043443-17044342 | Reverse length=299
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5061381865891
Replicate 27.2274655447031
Replicate 37.6314770001106
Condition 2: 8 Hour
Replicate 18.701739727106
Replicate 27.0715613516377
Replicate 38.0853215053378
Condition 3: 24 Hour
Replicate 16.5283559856948
Replicate 210.159639672156
Replicate 310.146799473323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176432.p1 GENE.S_Transcript_176432~~S_Transcript_176432.p1 ORF type:complete len:174 (+),score=34.78,CSD|PF00313.18|3.5e-22,zf-CCHC|PF00098.19|1.1e-06,zf-CCHC|PF00098.19|1.7e-06 S_Transcript_176432:61-582(+)
ATGTCGGACGGTGGTGGTGGTGGTGGAAAGAAATCGAGGGGGACAGTGAAATGGTTTAACGGGTGGAAGGGATTTGGGTTCATAACCCCAGACGAGGAAGGGTCCGATGATCTGTTTGTCCATCAGACTTCAATCCGATCCGAAGGGTTTCGGACCCTCCAAGAAGGGAAGCGGGTGGATTTCGAGGCTGATGTTAGCGAGGATGGCCGTACGAGGGCATCCAATGTGGTCCCCTTTAGAAGCTCAGGCTCAGGTGGGGGCCGTGGGGTACGTGGAAGAGGAAGAAGCAGGGGTTTAGACTGCTATAATTGTGGAAGGTTGGGTCATTTGGCTAGGGATTGCTATGGTGGAAGAAGGGACTATGATTATTATGTCGATGGTTATGGTGGGAGGAGAGGTAGAGGAGGGTATTATGGTAATTCCACTAGGGGTGGGAGGAGAGGAAGAGGAGGGAGGGGGGAATGCTATCATTGTGGGGAGGAAGGGCATTTTGCCAGGGATTGTTATGGTGATCAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176432.p1 GENE.S_Transcript_176432~~S_Transcript_176432.p1 ORF type:complete len:174 (+),score=34.78,CSD|PF00313.18|3.5e-22,zf-CCHC|PF00098.19|1.1e-06,zf-CCHC|PF00098.19|1.7e-06 S_Transcript_176432:61-582(+)
MSDGGGGGGKKSRGTVKWFNGWKGFGFITPDEEGSDDLFVHQTSIRSEGFRTLQEGKRVDFEADVSEDGRTRASNVVPFRSSGSGGGRGVRGRGRSRGLDCYNCGRLGHLARDCYGGRRDYDYYVDGYGGRRGRGGYYGNSTRGGRRGRGGRGECYHCGEEGHFARDCYGDQI*

Click here to download the sequence:
Link to NCBI Protein BLAST