Transcript Information: S_Transcript_176466.p1


Annotated TAIR IDAT5G20270.1
Annotated Gene Nameheptahelical transmembrane protein1
Annotated Gene Symbol(s)HHP1
Annotation TypeOrtholog
Chromosome Positionchr5:6841025-6842656 | Reverse length=332
E-Value9.5E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0373534018413
Replicate 22.8777551596758
Replicate 31.5536000505207
Condition 2: 8 Hour
Replicate 10.81129202293441
Replicate 20.8511029373809
Replicate 31.3322404753113
Condition 3: 24 Hour
Replicate 10.29680548220916
Replicate 20.80062377851227
Replicate 31.0966106263094


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176466.p1 GENE.S_Transcript_176466~~S_Transcript_176466.p1 ORF type:complete len:368 (+),score=44.43,HlyIII|PF03006.16|2.3e-67 S_Transcript_176466:249-1352(+)
ATGAGTAGCAGTACTAGTAGTGCAAGGGTTGCTTGGAAGAGGAAAAAACAGGGGAAAAATATGGAAGAAAATGGCACCCATTTCCAAAAACAAACAACCAAAGGAAACAAGAAGAAATACAGGCTTTTGAACTACAATGAACTCCCAGATTACATGAAGGATAATGAGTTCATTCTCATGTATTACAGAGCAGAATGGCCTCTAAAACAAGCTCTGTTCAGCTTGTTTCAATGGCATAATGAGACCATCAATATTTGGACGCATTTAATTGCTTTTGCTCTGTTCGTGTGTTTGACTGTTGTTAATGCTGCTCATGTGCCAATAGCTGTTGATCTCTTTGGAATTTTCAAGACATTTCCTGACAAGGGGCCAGAAGCAAATGTTTCTCATTCTCATGATACTGGTAAACTCTTAATGGACGTGACAAAACTGGTAGATTGGAAGCACATAAATCATACAGGAGGATCAAATCAAGTGCACAACATGGTAGCAACAGCAGTAACAGCAGCAAGGTGGCCATTCTATGTATACTTAGCAGGTTCAATGTTCTGCCTTCTATCAAGCACAGTCTGCCATCTCTTCTGCTGTCATTCCCACCACATGAACCTCCAGCTTCTCCGATTAGACTACACAGGGATCACGGTCATGATCATTACCTCATTCTTCCCACCAATCTACTACATCTTCCAATGTGAACCCTTATGGCAAATCATTTACTTGGCTGGGATTTCAGTCTTCGGGGCCTTTACAGTTGTGACTCTCCTTTCTCCGACTCTTTCCTCAGGCAAATGCAGGGCATTTCGAGCTGTCCTGTTTGTGTCAATGGGGCTGTTCGGGTTAGTCCCTGCAATCCACGCCTGTGTCTTGAACTGGACTAACCCGAGAAGGAACTTGACCCTCGCGTATGAGGCTGCTATGGCCTTGTCTTACCTTATAGGGACGGGTTTCTATGTGAGCCGAATTCCTGAGAGGTGGAGACCTGGTTGGTTTGATCTTGCAGGTCATAGCCATCAGATTTTTCATGTGTTTGTCGTCTTGGGTGCCTTGGCACACTACGGTGCTGCTCTCGTCTTTATGGAGTACCGAGACAGTGTTGGCTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176466.p1 GENE.S_Transcript_176466~~S_Transcript_176466.p1 ORF type:complete len:368 (+),score=44.43,HlyIII|PF03006.16|2.3e-67 S_Transcript_176466:249-1352(+)
MSSSTSSARVAWKRKKQGKNMEENGTHFQKQTTKGNKKKYRLLNYNELPDYMKDNEFILMYYRAEWPLKQALFSLFQWHNETINIWTHLIAFALFVCLTVVNAAHVPIAVDLFGIFKTFPDKGPEANVSHSHDTGKLLMDVTKLVDWKHINHTGGSNQVHNMVATAVTAARWPFYVYLAGSMFCLLSSTVCHLFCCHSHHMNLQLLRLDYTGITVMIITSFFPPIYYIFQCEPLWQIIYLAGISVFGAFTVVTLLSPTLSSGKCRAFRAVLFVSMGLFGLVPAIHACVLNWTNPRRNLTLAYEAAMALSYLIGTGFYVSRIPERWRPGWFDLAGHSHQIFHVFVVLGALAHYGAALVFMEYRDSVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST