Transcript Information: S_Transcript_176468.p1


Annotated TAIR IDAT5G20270.1
Annotated Gene Nameheptahelical transmembrane protein1
Annotated Gene Symbol(s)HHP1
Annotation TypeOrtholog
Chromosome Positionchr5:6841025-6842656 | Reverse length=332
E-Value9.5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5417397317524
Replicate 23.5009815764919
Replicate 31.4908798630455
Condition 2: 8 Hour
Replicate 12.2985450641221
Replicate 22.5453001446395
Replicate 32.2975165083213
Condition 3: 24 Hour
Replicate 11.1118653273656
Replicate 21.6285373587795
Replicate 31.5103020601866


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176468.p1 GENE.S_Transcript_176468~~S_Transcript_176468.p1 ORF type:complete len:334 (+),score=38.10,HlyIII|PF03006.16|2.5,HlyIII|PF03006.16|1.3e-58 S_Transcript_176468:271-1272(+)
ATGTGTAGTACAAGGGTTGCTTGGAACAGGAAAAAACAGGGGAAAAATATGGAAGAAAATGGCACCCATTTCCAAAAACAAACAACCAAAGGAAACAAGAAGAAATACAGGCTTTTGAACTACAATGAACTCCCAGATTACATGAAGGATAATGAGTTCATTCTCAAGTATTACAGAGCAGAATGGCCCCTGAAACAAGCTCTGTTCAGCTTGTTTCAATGGCATAATGAGACCATCAATATTTGGACGACATTTCCTGACAAGGGGCCAGAAGCAAATGTTTCTCATTCTCATGATACTGGTAAACTCCTAATGGATGTGACAAAACTGGTAGAATGGAAGCACATAAACCATACAGGAGGATTTAATCAAGTGCACAACATGGTAGCAACAGCAGTAACAGCAGCAAGGTGGCCATTCTATGTATACTTAGCAGGTTCAATGTTCTGCCTTCTATCAAGCACAGTCTGCCATCTCTTCTGCTGTCATTCCCACCACATGAACCTCCAGCTTCTCCGATTAGACTACACAGGGATCACGGTCATGATCATTACCTCATTCTTCCCACCAATCTACTACATCTTCCAATGTGAACCCTTATGGCAAATCATTTACTTGGCTGGGATTTCAGTCTTCGGGGCCTTTACAGTTGTGACTCTCCTTTCTCCGACTCTTTCCTCAGGCAAATGCAGGGCATTTCGAGCTGTCCTGTTTGTGTCAATGGGGCTGTTCGGGTTAGTCCCTGCAATCCACGCCTGTGTCTTGAACTGGACTAACCCGAGAAGGAACTTGACCCTCGCGTATGAGGCTGCTATGGCCTTGTCTTACCTTATAGGGACGGGTTTCTATGTGAGCCGAATTCCTGAGAGGTGGAGACCTGGTTGGTTTGATCTTGCAGGTCATAGCCATCAGATTTTTCATGTGTTTGTCGTCTTGGGTGCCTTGGCACACTACGGTGCTGCTCTCGTCTTTATGGAGTACCGAGACAGTGTTGGCTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176468.p1 GENE.S_Transcript_176468~~S_Transcript_176468.p1 ORF type:complete len:334 (+),score=38.10,HlyIII|PF03006.16|2.5,HlyIII|PF03006.16|1.3e-58 S_Transcript_176468:271-1272(+)
MCSTRVAWNRKKQGKNMEENGTHFQKQTTKGNKKKYRLLNYNELPDYMKDNEFILKYYRAEWPLKQALFSLFQWHNETINIWTTFPDKGPEANVSHSHDTGKLLMDVTKLVEWKHINHTGGFNQVHNMVATAVTAARWPFYVYLAGSMFCLLSSTVCHLFCCHSHHMNLQLLRLDYTGITVMIITSFFPPIYYIFQCEPLWQIIYLAGISVFGAFTVVTLLSPTLSSGKCRAFRAVLFVSMGLFGLVPAIHACVLNWTNPRRNLTLAYEAAMALSYLIGTGFYVSRIPERWRPGWFDLAGHSHQIFHVFVVLGALAHYGAALVFMEYRDSVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST