Transcript Information: S_Transcript_176543.p1


Annotated TAIR IDAT5G03240.1
Annotated Gene Namepolyubiquitin 3
Annotated Gene Symbol(s)UBQ3
Annotation TypeOrtholog
Chromosome Positionchr5:771976-772896 | Reverse length=306
E-Value9.5E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61414618235032
Replicate 20.33942753165407
Replicate 30
Condition 2: 8 Hour
Replicate 10.32808292795589
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.52301103637725
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176543.p1 GENE.S_Transcript_176543~~S_Transcript_176543.p1 ORF type:internal len:130 (+),score=15.45,ubiquitin|PF00240.19|1.6e-17,ubiquitin|PF00240.19|8.9e-26,Rad60-SLD|PF11976.4|3.1e-07,Rad60-SLD|PF11976.4|7.4e-12,Ubiquitin_2|PF14560.2|11,Ubiquitin_2|PF14560.2|0.0037 S_Transcript_176543:2-388(+)
GGCATCCCACCGGACCAGCAACGTCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCAGGACACTTGCGGACTACAACATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGCGGCGGCATGCAGATCTTTGTCAAGACACTGACTGGCAAGACCATCACGCTGGAGGTTGAGTCGTCAGACACGATCGATAATGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCGCCAGACGAGCAGAGGTTGATCTTTGCTGGGAGGCAGCTGGAGGATGGGCGTAGCTTGGCTGACGACAACATCCAGAAGGAGGCCACCCGTCACGTAGCACGCTCCACCTTGTGCTGCGCCTGCGCGGCGGCATGCAGATCTTTGTCAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176543.p1 GENE.S_Transcript_176543~~S_Transcript_176543.p1 ORF type:internal len:130 (+),score=15.45,ubiquitin|PF00240.19|1.6e-17,ubiquitin|PF00240.19|8.9e-26,Rad60-SLD|PF11976.4|3.1e-07,Rad60-SLD|PF11976.4|7.4e-12,Ubiquitin_2|PF14560.2|11,Ubiquitin_2|PF14560.2|0.0037 S_Transcript_176543:2-388(+)
GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDEQRLIFAGRQLEDGRSLADDNIQKEATRHVARSTLCCACAAACRSLSR

Click here to download the sequence:
Link to NCBI Protein BLAST