Transcript Information: S_Transcript_176544.p1


Annotated TAIR IDAT5G03240.1
Annotated Gene Namepolyubiquitin 3
Annotated Gene Symbol(s)UBQ3
Annotation TypeOrtholog
Chromosome Positionchr5:771976-772896 | Reverse length=306
E-Value1.6E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.84856882913519
Replicate 30.10133371474506
Condition 2: 8 Hour
Replicate 10.11717247426996
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.62263218616339
Replicate 30.41574798469972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176544.p1 GENE.S_Transcript_176544~~S_Transcript_176544.p1 ORF type:internal len:182 (+),score=24.20,ubiquitin|PF00240.19|2.9e-17,ubiquitin|PF00240.19|6.5e-33,ubiquitin|PF00240.19|5.4e-16,Rad60-SLD|PF11976.4|5.7e-07,Rad60-SLD|PF11976.4|6.9e-16,Rad60-SLD|PF11976.4|1.3e-05,Ubiquitin_2|PF14560.2|19,Ubiquitin_2|PF14560.2|0.0002,Ubiquitin_2|PF14560.2|0.0026,Rad60-SLD_2|PF13881.2|0.46,Rad60-SLD_2|PF13881.2|0.059,Rad60-SLD_2|PF13881.2|6.3e+02 S_Transcript_176544:2-544(+)
GGCATCCCACCGGACCAGCAACGTCTCATTTTCGCGGGCAAGCAGCTCGAGGATGGCAGGACACTTGCGGACTACAACATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGCGGCGGCATGCAGATCTTTGTCAAGACACTGACAGGCAAGACCATCACTCTCGAGGTGGAGTCATCTGACACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGTAGGACGCTGGCAGACTACAACATCCAGAAGGAGTCTACGCTCCATCTGGTGCTGCGCCTGCGCGGCGGCATGCAGATCTTTGTCAAGACATTGACAGGCAAGACCATCACGCTTGAAGTCGAGTCGTCTGACACCATTGACAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAGCAGCGCCTCATCTTAGCACGCTCCACCTTGTGCTGCGCCTGCGCGGCGGCATGCAGATCTTTGTCAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176544.p1 GENE.S_Transcript_176544~~S_Transcript_176544.p1 ORF type:internal len:182 (+),score=24.20,ubiquitin|PF00240.19|2.9e-17,ubiquitin|PF00240.19|6.5e-33,ubiquitin|PF00240.19|5.4e-16,Rad60-SLD|PF11976.4|5.7e-07,Rad60-SLD|PF11976.4|6.9e-16,Rad60-SLD|PF11976.4|1.3e-05,Ubiquitin_2|PF14560.2|19,Ubiquitin_2|PF14560.2|0.0002,Ubiquitin_2|PF14560.2|0.0026,Rad60-SLD_2|PF13881.2|0.46,Rad60-SLD_2|PF13881.2|0.059,Rad60-SLD_2|PF13881.2|6.3e+02 S_Transcript_176544:2-544(+)
GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLILARSTLCCACAAACRSLSR

Click here to download the sequence:
Link to NCBI Protein BLAST