Transcript Information: S_Transcript_176583.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20791407214985
Replicate 20
Replicate 30.072041937826565
Condition 2: 8 Hour
Replicate 10.083302305926301
Replicate 20
Replicate 30.16653005941392
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.098523610957485


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176583.p1 GENE.S_Transcript_176583~~S_Transcript_176583.p1 ORF type:complete len:256 (-),score=22.93,zf-RVT|PF13966.2|1.8e-13 S_Transcript_176583:255-1022(-)
ATGCTGAGCCTGCTGTACAGTCTACCCCCGGGAGCCCCAGGAAATTTATCTTGCAGGTGGCCTACATGTTCTTTCCCCTTACGAGATTCATGCTGGGTAATGGGGATCAATATGTTTTGGGAGGATATTTGGTACGAAGGAGGGATGTTTTTTGGTAGTTTTCCCAGGCTGTTTCTTTTTTGCACGCTCCATAATGCTCCAGTAGGAGCGTTCTATGTGCCCCAACCCAGAGCTGGGGATCTTCACCTACGTCGGGCCCCACATGACAAGTGGAGGAGCTTAAGTGTTTTGGAACAGGTACATTTAACTAATGAACCTGACTCTAGGAGGTGGCTTGGATATTCAACAGGGGAGTTCTCATGCAAGTCCTTCCTTAGGAATTTGGGTACAAATCATCCGGCTTTTCCATTGCCTAGTATTTTTAAGGCAAGGGTTCCAAAGAAGGTCCAGGCTTTTGTTTGGACACTTGTGTTAAACAAAATTAAGACAAACGATGTGCTACGAAGGCGGTGTCACAATACAGCTTTGTCACCAGGTATTCGTGTGATGTGTGGACGTGATAATGAGACAGCATCCCATCTGTTCTTACATTGCACTCTTGCTAGGGATCTTTGGGATAGGATGTTTGGGGTCCTTGGAGAATCTCGAGAGTGCCCGTCCTCTGTCATGGAGGTCCTACAAATTCACTTTAGGGGATTTGGGAGAGACAAGGAGAAGGAATGCCTTTTTCACTGTTTTGTGGCATATTTGGCTGGAAAGAAATGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176583.p1 GENE.S_Transcript_176583~~S_Transcript_176583.p1 ORF type:complete len:256 (-),score=22.93,zf-RVT|PF13966.2|1.8e-13 S_Transcript_176583:255-1022(-)
MLSLLYSLPPGAPGNLSCRWPTCSFPLRDSCWVMGINMFWEDIWYEGGMFFGSFPRLFLFCTLHNAPVGAFYVPQPRAGDLHLRRAPHDKWRSLSVLEQVHLTNEPDSRRWLGYSTGEFSCKSFLRNLGTNHPAFPLPSIFKARVPKKVQAFVWTLVLNKIKTNDVLRRRCHNTALSPGIRVMCGRDNETASHLFLHCTLARDLWDRMFGVLGESRECPSSVMEVLQIHFRGFGRDKEKECLFHCFVAYLAGKKC*

Click here to download the sequence:
Link to NCBI Protein BLAST