Transcript Information: S_Transcript_176593.p1


Annotated TAIR IDAT5G38190.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G32010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15234188-15237906 | Forward length=953
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4490491934215
Replicate 20.67677268581334
Replicate 32.3760580230406
Condition 2: 8 Hour
Replicate 13.0091041551783
Replicate 23.0195133133373
Replicate 32.8769855663165
Condition 3: 24 Hour
Replicate 11.0721415210108
Replicate 22.0856268321792
Replicate 31.8568376249165


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176593.p1 GENE.S_Transcript_176593~~S_Transcript_176593.p1 ORF type:complete len:163 (+),score=21.32 S_Transcript_176593:806-1294(+)
ATGGGTAAAAAGTCTTGTGCTCAAAAGGGACCTATTTCTAGGGCTAGAAATGAGACAATAGATTTAGTAGGTAAAATTTTTAGTTCTAGAGTTATGGAAAAGGGCAGTGGCATCAATGTGTTGGAACTTTCTTATCCTGAGATGCTTCGTCAATCCGGGGTCTTTCCAGAGGGTTTTGATGTTGTTATTCCTTACGAACCCGTTAGGGCTGAATGGTATTGCCCTGGCTTTGTGTGCTTCTTTACCCATATATTTGAAATTGGGTTTGGCTTCCCTGTATCCTCTTTTATCAAGCGGTTCTTTGAGCTTTTTCCTCTAGCTCCAGCCCAATTGCTCCCCAGATTTTGGCGTTTGCTAGTTTGTGTTGATAAGATATGTATGAGGCATGGGTTAGTCATGGATGTCGGGGACATTTTCTCGGTGTATCAGGTGAGGGGAATGGTGGTTATTGGTTTCAAGCACGAGTATAGGAAGGGATGGAACATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176593.p1 GENE.S_Transcript_176593~~S_Transcript_176593.p1 ORF type:complete len:163 (+),score=21.32 S_Transcript_176593:806-1294(+)
MGKKSCAQKGPISRARNETIDLVGKIFSSRVMEKGSGINVLELSYPEMLRQSGVFPEGFDVVIPYEPVRAEWYCPGFVCFFTHIFEIGFGFPVSSFIKRFFELFPLAPAQLLPRFWRLLVCVDKICMRHGLVMDVGDIFSVYQVRGMVVIGFKHEYRKGWNI*

Click here to download the sequence:
Link to NCBI Protein BLAST