Transcript Information: S_Transcript_176639.p2


Annotated TAIR IDAT5G18230.2
Annotated Gene Nametranscription regulator NOT2/NOT3/NOT5 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6021610-6027031 | Reverse length=845
E-Value8E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47951353576902
Replicate 22.1864025687627
Replicate 34.901447878074
Condition 2: 8 Hour
Replicate 14.3227142534729
Replicate 21.4108373016044
Replicate 33.5526412674969
Condition 3: 24 Hour
Replicate 12.6568101542614
Replicate 22.5522310333725
Replicate 33.0675459411628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176639.p2 GENE.S_Transcript_176639~~S_Transcript_176639.p2 ORF type:5prime_partial len:222 (-),score=46.62,Not3|PF04065.11|2.1e-73 S_Transcript_176639:1316-1981(-)
GTTCAAGAAGGTGTCGATGTTTTCGACAGTATTTGGAACAAGGTGTATGACACTGACAATGCGAATCAGAAGGAGAAGTTTGAGGCTGATTTGAAGAAGGAAATTAAGAAATTGCAGAGGTATAGAGACCAAATTAAGACTTGGATTCAATCCAGTGAGATTAAGGACAAAAAGGTTAGTGCATCTTATGAGCAGGCTCTGGTGGATGCCCGTAAGCTTATTGAGCGTGAGATGGAAAGGTTTAAGATCTGTGAGAAAGAGACCAAGACGAAAGCATTTTCTAAAGAAGGCCTCGGTCAACAGCCTAAAACTGATCCAAAGGAGAAAGCAAAGTCAGAGACAAGAGATTGGTTAAACAATGTGGTAGGAGAGCTGGAGTCCCAAATTGATAATTTTGAGGCTGAGTTGGAGGGCTTATCAGTCAAAAAAGGAAAGACAAGGCCCCCTAGACTGACTCATCTGGAGACTTCAATATCTCGTCACAAGGCTCATATAATGAAGTTAGAATTGATTTTGAGATTATTGGATAATGATGAGTTGAGTCCGGAGCAGGTTAATGACGTTAAAGATTTCCTTGACGATTATGTTGAGCGAAATCAGGTGCATATGTTGTATGCTGTTTATGGAATATCAATTATAGGAGAATATTATGTATTATATATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176639.p2 GENE.S_Transcript_176639~~S_Transcript_176639.p2 ORF type:5prime_partial len:222 (-),score=46.62,Not3|PF04065.11|2.1e-73 S_Transcript_176639:1316-1981(-)
VQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKTRPPRLTHLETSISRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQVHMLYAVYGISIIGEYYVLYI*

Click here to download the sequence:
Link to NCBI Protein BLAST