Transcript Information: S_Transcript_176720.p1


Annotated TAIR IDATCG00860.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.1
Annotation TypeOrtholog
Chromosome PositionchrC:86474-93358 | Forward length=2294
E-Value1.8E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5338905611055
Replicate 20.50865220881879
Replicate 30.9035346208104
Condition 2: 8 Hour
Replicate 10.86039038743476
Replicate 20.70919404909796
Replicate 30.86000537887533
Condition 3: 24 Hour
Replicate 10.37772132836762
Replicate 20.78376293635784
Replicate 31.4537201386234


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176720.p1 GENE.S_Transcript_176720~~S_Transcript_176720.p1 ORF type:internal len:347 (-),score=18.42,DUF825|PF05695.8|6.8e-220 S_Transcript_176720:2-1039(-)
GTTTCCCACCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCGTTAGTTGGGGGAAGAATCCGTACGAATCGGATTTGTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAGTGTGTGGTTGGTAAACAAGGATCGTTTTTTTAGCAAGGTACGGAATGTATCGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGAATTCTAGCCAATTGAAAGGATCTTCTGATCAATCTAGAGATCGTTTGGATTCCATTAGGAATGCGGATTCGGAATATCATACATTACTCAATAAAAGGGAGATTCAACAACTAAAAGAAAGATCGATTCTTCGGGATCCTTCCTTTCTTCAAACGGAAGGAACAGAGATAGAATCAGACCTATTCCCGAAATGCCTTTCTGGATATTCCTCAATGTTTCGGCTATTCACGGAACGTGAGAAGCAGATGAATAATCATCTGCTTCCGGAAGAAATCGAAGAACTTCTTGAGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGGCAGATGGTCAGAACTTCATCTGGGTTCAAATCCTACTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAACAACAAGATGTTTCTTTTGCCCCTTCCAGGCGATCAGAAAATAAAGAAATGGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAACCGGATATGGACAGTTCCGATAAGATTTCATTCTTGAACAAAAATGCATTTTTTTACTTATTTCATCTATTCTATGACCGGAACAGGGGGGGGTACACATTCCACCACGATTTTGAATCCGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176720.p1 GENE.S_Transcript_176720~~S_Transcript_176720.p1 ORF type:internal len:347 (-),score=18.42,DUF825|PF05695.8|6.8e-220 S_Transcript_176720:2-1039(-)
VSHLFSRNKWAISLQNCAQFHMWQFHQDLFVSWGKNPYESDLLRNISRENWIWLDSVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTNSSQLKGSSDQSRDRLDSIRNADSEYHTLLNKREIQQLKERSILRDPSFLQTEGTEIESDLFPKCLSGYSSMFRLFTEREKQMNNHLLPEEIEELLENPTRSIRSFFSGRWSELHLGSNPTERSTRDQKLLKKQQDVSFAPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMDSSDKISFLNKNAFFYLFHLFYDRNRGGYTFHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGL

Click here to download the sequence:
Link to NCBI Protein BLAST