Transcript Information: S_Transcript_17675.p1


Annotated TAIR IDAT2G38440.1
Annotated Gene NameSCAR Homolog 2
Annotated Gene Symbol(s)ITB1, SCAR2, DIS3, WAVE4, ATSCAR2
Annotation TypeOrtholog
Chromosome Positionchr2:16095550-16100851 | Forward length=1399
E-Value2.1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5708345029675
Replicate 29.6629736636558
Replicate 38.900275792249
Condition 2: 8 Hour
Replicate 110.813527625445
Replicate 29.7253030811434
Replicate 310.518756135864
Condition 3: 24 Hour
Replicate 110.649083573217
Replicate 210.024852454608
Replicate 39.4273909174727


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17675.p1 GENE.S_Transcript_17675~~S_Transcript_17675.p1 ORF type:complete len:1838 (+),score=520.30 S_Transcript_17675:204-5717(+)
ATGCCGCTGAACAGGTACCAGATACGAAACGAGTACAGTTTAGCGGATCCAGAGTTGTATAAAGTTGCCGATAGAGATGATCCTGAAGCTCTTTTGGAAGGCGTTGCCATGGCCGGACTGGTTGGCGTTCTTCGCCAGCTCGGCGACTTAGCTGAGTTTGCGGCTGAGATATTCCATGGCTTACATGAGGAAGTCATGGCTACTGCTTCAAGAGGTCACAGCCTAATTGTTCGAGTCCAACAACTAGAAGCTGAATTTCCTTCTGTAGAGAGGACACTTCTTTCTCAAACAAGCCATACAGCTTTTCTCTACAACTCAGGTGTTGACTGGCATGCTAATCTCCGTATGGATGAGAATGTAGTCACTCAGGGAGATTTACCTCGATTTGTAATGGACTCTTATGAGGAGTGTCGTGGCCCTCCTCGGCTCTTCCTGCTTGACAAGTTTGATGTTGCGGGTGCGGGTGCATGTTTAAAACGCTACACAGATCCCTCATTCTTCAAAGTAGAAGCAACATCATCTACTGGCAAAAAATCAGAAGGTCAGAGGGAAAAGAAAACTCGAAGAGTGAAGAGGAGAGGACCACGTTGGAGAAATGGAGATACTCCAGAAACCTTTCCATCATCACATGCCAAACTACATCAACTGTTTTTGGAGGAGAGTATTGAGAGTGGTGGTAATGATCCTGAACGTCGTGTGAAACTGAAGAAGAGGCAATTTACAGGATCTCTGTTTGATCAGGATAAGGGTAAAAGCTACATGGAGAAGTTTCTGGATACTTGTTCACCCGAGCAGAAAATTGTTCATGAAGTCTGCATCGATGCTTTGCCCCTGCCTTGGACTTCGGAGAATGGTTGTGAATCTGGTCGTGAGATAGTTGAAATTGGCACTGTTAGTCCCCTCAAAGAATCTACACAGGCTGATAAAAGCTCATCACCTAATACCAGGGAAATGGTGGTAAAACCATCCATAGTGGATATTAACGACAGCAATTTGAATGAAACTATACCAACTGAAGCTTTGGCTGGGCCTGGACTAAACCAAGAAGATGATGCTGGTGATATGTCATCTACTCTAAAGTTGATGAATGGTGAAGAACATGCTGGTGGAGAAAGTACGTCAGAAGTTGATAATGGTGAAGGTTTCAATTCAGATGATGCTGGTAGTGAGATTGCTGGTAGTGAGATTGATAATTATATGGATGCCCTTGCTACCATTGAGTCTGAAGTTGAGACAGATTCTGAATACAAGAAAAATCCACACTATATGAATCTGAAACCAATCGTGGTTGATTCTGATGCGAGTGAAGGGCGGAGAGCACCTCAGGGTTATTTTCTGGATTCTCAGTCAATCGAGAATTCGATTACATCAGAGGATGGTACCAATTTTTCCAAAGATAGAGATTCTTTATGCTCAATTAGTGTCGACACCCTGGCTGAAGCTACACCAGGCCATGATGCAGCATGTGTGACTATTACTTCTGTTACAACCGCTAATAATGATCGTGAGAACATGTCTCTTGATCGTCATTCCATGTCTGATGAGGTTCCTCAAAATATAACAGAACTGCATGCTGGAGGGAGTACTGTGGCTGGTGGAGTTGATGACATTTTCAACAGTGCACAGGAGTTTGGGGAGGCTTCTGGCAATTCATGTCTTACAGATCCAAATGCCATGATCCCTTCTGTAGACCAGGAAACTATTGTGAGGGAGAATTCCTTACCAAGGACAGGCTTGGATGAGGTTTGCTTTAAGTCTACTGTGCCTGATATTTTGTCTGGAGGTCTTGATCAAGGGCATGCTAATCAAACTAATTTTTGGCCTTGCAATGAAGCAGTTGTTGATGCCCGTGAGAGGACACCTAGTGGGCATTGGTCTAGTGGAGAGCAGCCTATGCATGATATGGCAGGTCGCAATTTTAGTGCCTATTCTGAAAGTTTACCTAGCACTCATGACGATTTAGTTGATTTGCTTCAAATAGAATCTAAAAACACTGATTCAGTTGAAGAGCACAGTATTGACTTGGGCATGACGGATGTCAATGCTTGTTCAGACATCAAACCTCCAGCTGCTAATCCACCTCTGTGTGATCCTGAAAATCCAGAAGCTGTGAAACCTATTGATGTGGCTTCTAATGTAGATTTCTGTATTCCAACAATCGAAGGGCATTCAGAAGATAAGCATTCCGCCTCAGATTCCGAACAGAATTTTAAGATTCCAGAGCAGATCTCTGAATTGATGGATCCCGATTATACACCTCCATTCAATTTGTCAGCAGAAGCTCTCCCTAAATCTCAAGAAGTTCATAGTATCCAAGAGGTATTCACTGATGTTGAGGGCGAAGAGAAAGCATCATCTGCTTCCCCAAGTGTTGGTCATACTGAAACATTGTTTCCCTTCTCTAATAGGTCAGAAACTTGTGCTTCAGCAAGCACTTTCTCAAAATACACCGCTAAAGCTGAATTAGCCAAGGCTGGCTCCTTAGAGGATGCTCTACCAGGGGCTACACCTTCTGGGGAATCTAATACTGAGGTAGTTTCTCGATCTTCTGATGGGGAAGCAATAGATAACTCCACGTTGGGAAAGTCATCTCCTGTGCTGGATTTGTCAGAGTCCCAAGATCAAGGAGAGAAGCCGCCCTCAGAGAAAGCCAATGACACACCATTAGATCATCATCTTGTTGAAGCTGGTAAGCAATATTCTGGGAGTGAGACCATTAATGAAGGGCCCTCTGTTTCTGTTAGTGGAGATGAATTCGAAACTACACTTCATAGGGTTTCATCTGAAAGAGATGCTGCTTGTGAGGATGTTGCTCCTAATTTGGATCAATTGGATACAGTTGAGACTGTAAAAAGTTGGGATGACTGTGAAACTCAAGTGATCATCAGTGATCATGATCAGAATGACAACCATCATGATGAGACTGTTTCTCATGATGCAGTTTTGTTTGATATAGCTTCTAAGCCTGCCAGTGATCCAAATTCTGCATTGACAGCTGAGAAATCTTTAAATTTTGATAGTAGTATGGGAAATGTAGAACATACAGATACTGGCAGTATCAGCCAAGATGATGCTGAGGAGTATCACCATGAACAGGTCATTCCTGTAACCCCATCTTCATCACTGGTTACTGAGTTCCAGGAACTACCTGTCTCAGAAGAACCTGTTTCGGGATCAGTCACTGAGGAATGTCATCAGAATGAGGAGGAACTTGCTTCAATGCCTAGTGCAGAACTGGCTGCACAAAAGCGCGTGGATGTTGTTGAAGATGTTCCTGTAAATTCAAATCCCAACATGTGGAATATGTCCTCTCATGGAACTCCCACAGTGACATTGCTCAATGATTCATTGACGGACGATGTTCAGAGTAGTGAGAAGTTTGTCGTAGAGCCACTATCAGAGAATACCAGCAAAGATATTAAGTCTACCTCCTCCCACCAGATCCATTTGTTCGAAGGAGAGGAAGATGATGCGGATTTACATGACCGTGTATTGCATGATAACCAAGCTGAAGTGAAACCTTTAGATGTTGATGCATTGTCTTCTCAGTCAATGAACTATTCCTATCAGATTCAGGCTCCAGCGCATATTGAGAAAGAGGGAACTTCTTTGCATGCTAATGTATTTTCTTCTCAGTCAATTAACTATTCTAAGCAGATTCAGGATCCAGCACATCTTGATAGAGAGGGAGTGCCTTTGCATGCTGATGAATTGTCTTCGAAGTCAGTTAACTTCTCTATGCAGAATCAGGCTCCTGCACATGTTGATAGAGAAGGAATTATTAATGCTACTTCTTCATATAATCAAGGCCAACAGTTGGTGCCTACTTTTGCACTACAGTCAGCCGTGTGCTCAGTAGACAGTTCTAGGATACCCATGATAGAGCCTACTGCCATCTTCCCTGGAAATAACTTGCTATATGGCTCTAACCAAACCCCTCCTAGAGTTGAGAACTCGAGGGAACCATTCTATACATCTGGTTTTCCCATCTTTGGCATGCTCCCAGCTGAACCTCAAATCAATCTGGATTCACCTCCTCTGCCTCCTTTGCCTCCTATGCAATGGAGACTTAGCAGGTTCCAAAACCCTTCTGCAGCTCCAGAGAGACAGAATGTGCAACATACACATAGTCCAATCCAACCAGTGATGCAACCAACTTCCAATAATGAACCTGATTCTGTTGCCCAAACATCTAAACCAGAGACAAAACCTGAATATTCTGATGGTTTTGGGGCACAGCAAGGAGTCCCTCTTCCAATGACAAATGCAGTTCCAGAGGTTTCATCAGTGAACATAAATGAAATGGGAAGGGGGCTGGAATCATCAGTGAACATAAATGAAATGGGAAGGGCAGATAATCTGTCACTCCCTGCTACATCGACATCCACAACAGGTCAGAATGACATCCGAATATCAGAAGAACAATCTTGTCAGGCTAGTAATATGAATCCTCATGAAAATGGATCACTGTTTGAAGGTCATGTTTCTCAGCCTGAGGGGAAATCGGATATTGATATCGGTGTTCAAAATGAGGAGCTTGAAGAAATTCCTAAGTTGACTGAGCAGGAGGCTGTGAACTCTGATGTTCAGTTTCTGCCGTCATCGACAACACACTTTGAATGGCAGCCACCTCCAGGTTTAATGGCTCCTGGGGATGGGATACCCTGGTCGAGTGCCCTTGATGGAGTTCCAACCAGTGTTGGTGGAAATGCAAATGGGACTTTGCTAAAGAAGCCTCAAAGACCTAGAAACCCTCTCATTGATGAGGTTGTTGCTATTGACAAAAGCAAGTTGAGAAAGGTGGAAAGGGTTAAGTCACCAGTTGAATCAAAACCAGAAGAAGGGGAGTCTCTCCTAGAGCAATTGCAGTTAAGAAAGGTGGAAAGGGTTAAGCCGGCAGCGGAAACAAAAGCGGAAGAGAAGGAATCTTTGCCTGGTCAGCTGCAGTTAAGGAAGGTAGGGGAAAAGGTTAAACCACCAGTGGAACCGAAAGCTGAAGAGAGGGAGTTTTCACTGGAACAATTGCAGTTGAGAAAAGTTGGGGAAAGGGTTAAACTGGAGGTTGAATCGAAAACTGAAGAACGAGAGTCCCTGCTGGAACAGTTAAAATTGAGAAAGGTGGGGGAAAGGATTAAGCCAGTGGTTGAACAGAAACCCGAAGAAACAGAATCTCCAAAGATACAATTGAGAAAGGTAGGGGAGAGAGTTAAACAAGAGACGGAACAGAAAAGTGAAGAAACAGAATCTCCGCGGGTGCATCTGAGAAAGGTAAGTGAAAGGGCACTTCCTCTGGTTGGTTCAAAATCAGAAGACAGAGACTCACTATTTGAGCAGATACGAAATAAGTCCTTCAATCTGAAACCAGCTGTGGTGGCTAGGCCAAACATCCAAAGCCTACAAGGTCCACGCACAAATTTGAAGGTTGCTGCCATTTTAGAGAAAGCAAGCAACATCCGTCAGGCGATGGTTGGAAGTGATGAAGAGGATGATGCAGATACTTGGAGTGACTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17675.p1 GENE.S_Transcript_17675~~S_Transcript_17675.p1 ORF type:complete len:1838 (+),score=520.30 S_Transcript_17675:204-5717(+)
MPLNRYQIRNEYSLADPELYKVADRDDPEALLEGVAMAGLVGVLRQLGDLAEFAAEIFHGLHEEVMATASRGHSLIVRVQQLEAEFPSVERTLLSQTSHTAFLYNSGVDWHANLRMDENVVTQGDLPRFVMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKVEATSSTGKKSEGQREKKTRRVKRRGPRWRNGDTPETFPSSHAKLHQLFLEESIESGGNDPERRVKLKKRQFTGSLFDQDKGKSYMEKFLDTCSPEQKIVHEVCIDALPLPWTSENGCESGREIVEIGTVSPLKESTQADKSSSPNTREMVVKPSIVDINDSNLNETIPTEALAGPGLNQEDDAGDMSSTLKLMNGEEHAGGESTSEVDNGEGFNSDDAGSEIAGSEIDNYMDALATIESEVETDSEYKKNPHYMNLKPIVVDSDASEGRRAPQGYFLDSQSIENSITSEDGTNFSKDRDSLCSISVDTLAEATPGHDAACVTITSVTTANNDRENMSLDRHSMSDEVPQNITELHAGGSTVAGGVDDIFNSAQEFGEASGNSCLTDPNAMIPSVDQETIVRENSLPRTGLDEVCFKSTVPDILSGGLDQGHANQTNFWPCNEAVVDARERTPSGHWSSGEQPMHDMAGRNFSAYSESLPSTHDDLVDLLQIESKNTDSVEEHSIDLGMTDVNACSDIKPPAANPPLCDPENPEAVKPIDVASNVDFCIPTIEGHSEDKHSASDSEQNFKIPEQISELMDPDYTPPFNLSAEALPKSQEVHSIQEVFTDVEGEEKASSASPSVGHTETLFPFSNRSETCASASTFSKYTAKAELAKAGSLEDALPGATPSGESNTEVVSRSSDGEAIDNSTLGKSSPVLDLSESQDQGEKPPSEKANDTPLDHHLVEAGKQYSGSETINEGPSVSVSGDEFETTLHRVSSERDAACEDVAPNLDQLDTVETVKSWDDCETQVIISDHDQNDNHHDETVSHDAVLFDIASKPASDPNSALTAEKSLNFDSSMGNVEHTDTGSISQDDAEEYHHEQVIPVTPSSSLVTEFQELPVSEEPVSGSVTEECHQNEEELASMPSAELAAQKRVDVVEDVPVNSNPNMWNMSSHGTPTVTLLNDSLTDDVQSSEKFVVEPLSENTSKDIKSTSSHQIHLFEGEEDDADLHDRVLHDNQAEVKPLDVDALSSQSMNYSYQIQAPAHIEKEGTSLHANVFSSQSINYSKQIQDPAHLDREGVPLHADELSSKSVNFSMQNQAPAHVDREGIINATSSYNQGQQLVPTFALQSAVCSVDSSRIPMIEPTAIFPGNNLLYGSNQTPPRVENSREPFYTSGFPIFGMLPAEPQINLDSPPLPPLPPMQWRLSRFQNPSAAPERQNVQHTHSPIQPVMQPTSNNEPDSVAQTSKPETKPEYSDGFGAQQGVPLPMTNAVPEVSSVNINEMGRGLESSVNINEMGRADNLSLPATSTSTTGQNDIRISEEQSCQASNMNPHENGSLFEGHVSQPEGKSDIDIGVQNEELEEIPKLTEQEAVNSDVQFLPSSTTHFEWQPPPGLMAPGDGIPWSSALDGVPTSVGGNANGTLLKKPQRPRNPLIDEVVAIDKSKLRKVERVKSPVESKPEEGESLLEQLQLRKVERVKPAAETKAEEKESLPGQLQLRKVGEKVKPPVEPKAEEREFSLEQLQLRKVGERVKLEVESKTEERESLLEQLKLRKVGERIKPVVEQKPEETESPKIQLRKVGERVKQETEQKSEETESPRVHLRKVSERALPLVGSKSEDRDSLFEQIRNKSFNLKPAVVARPNIQSLQGPRTNLKVAAILEKASNIRQAMVGSDEEDDADTWSDC*

Click here to download the sequence:
Link to NCBI Protein BLAST