Transcript Information: S_Transcript_176814.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeOrtholog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value1.4E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52923582001779
Replicate 23.886059524335
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 11.1510864091634
Replicate 21.525353316345
Replicate 31.2716840900699
Condition 3: 24 Hour
Replicate 11.4273645462604
Replicate 21.0945590818122
Replicate 31.5763777753198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176814.p1 GENE.S_Transcript_176814~~S_Transcript_176814.p1 ORF type:complete len:352 (+),score=14.14,LRRNT_2|PF08263.8|1.3e-09,LRR_8|PF13855.2|28,LRR_8|PF13855.2|23,LRR_8|PF13855.2|3.1e-06,LRR_8|PF13855.2|0.095,LRR_8|PF13855.2|8.2e+02,LRR_4|PF12799.3|4.6,LRR_4|PF12799.3|0.00095,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|1.2e+02,LRR_4|PF12799.3|2.3 S_Transcript_176814:50-1057(+)
ATGGAAAGCCACCGACACCAAACCTTGTTGTTCCTCTCTTTCACTCTCCTCCTCCTTCAATCATCCGTTATCGGAGCTGATCACTGCAACCCGGACGACAAGAAAGCGCTGTTTCAGATCAAGGAAGCCTTCCAGAACGACTACCAGTTTGCGTCCTGGACCAACGACAGCGATTGCTGCTCATGGTACATGCTCAAATGCGACGAGAACACTCACCGTGTCACTGATCTCTTCATTGACAACAGCGACACGGTTAATGGCACTATTCCTGATGCCATAGGTGACCTTCCTTACTTAACATTCATCCGGTTTTCTAAGCTCCCTAAACTAACCGGTCCAATCCCTGAATCCCTCACCCGGCTCAAGAATCTCAATTACCTTTGGATCACCTACACCAATATCTCCGGTTCAATTCCTGACTTTATAGGTGACAAGCTCACTAAACTCACTTACATCAATCTCTCAGTTAATAACCTCACCGGTCCAATCCCGCCCTCGCTGTCGAAACTTGAAAGCCTCGGAGCCCTGTTCTTGGACCGGAACCGGCTCACCGGTTCAATCCCGGATAGCTTTGGTGGGTTCATGAATAACCCAGATTTTTACCTCCCGCTCACCAAAAACCAGCTATCTGGGCCGATCCCAGAATCGTTAGGAACCGTTAATTTCACCAACCTTGATCTTTCTCGAAACGGGTTCACCGGAGATGCTCTATTCTTGTTTGGTAAGAACAAGGGTTTGCAATTTGTTGATCTCTCAAGGAACAAATTCTCGTTCAACATGACGAATTTGAAGGTGCCCGAAAGCTTGATAGGGTTTGATGTGAGCCATAATATGATTTATGGGAGCATCCCACCAGCATTTGGGAAGCAAACTTTGAATAATTTTAATGTAAGTTACAACCGGTTGTGTGGACCAGTCCCAACCGGAATTGATTTGGACCGGTTCGACCAGTACGACTTTGCTCATAACAAGTGCTTGTGTGGCTCTCCTTTGCCTCCTTGCACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176814.p1 GENE.S_Transcript_176814~~S_Transcript_176814.p1 ORF type:complete len:352 (+),score=14.14,LRRNT_2|PF08263.8|1.3e-09,LRR_8|PF13855.2|28,LRR_8|PF13855.2|23,LRR_8|PF13855.2|3.1e-06,LRR_8|PF13855.2|0.095,LRR_8|PF13855.2|8.2e+02,LRR_4|PF12799.3|4.6,LRR_4|PF12799.3|0.00095,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|1.2e+02,LRR_4|PF12799.3|2.3 S_Transcript_176814:50-1057(+)
MESHRHQTLLFLSFTLLLLQSSVIGADHCNPDDKKALFQIKEAFQNDYQFASWTNDSDCCSWYMLKCDENTHRVTDLFIDNSDTVNGTIPDAIGDLPYLTFIRFSKLPKLTGPIPESLTRLKNLNYLWITYTNISGSIPDFIGDKLTKLTYINLSVNNLTGPIPPSLSKLESLGALFLDRNRLTGSIPDSFGGFMNNPDFYLPLTKNQLSGPIPESLGTVNFTNLDLSRNGFTGDALFLFGKNKGLQFVDLSRNKFSFNMTNLKVPESLIGFDVSHNMIYGSIPPAFGKQTLNNFNVSYNRLCGPVPTGIDLDRFDQYDFAHNKCLCGSPLPPCT*

Click here to download the sequence:
Link to NCBI Protein BLAST