Transcript Information: S_Transcript_176935.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.12377675223893
Condition 2: 8 Hour
Replicate 10.2862468498944
Replicate 20.3002932703319
Replicate 30.28611875979841
Condition 3: 24 Hour
Replicate 10.14660995631271
Replicate 20
Replicate 30.3385509316123


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_176935.p1 GENE.S_Transcript_176935~~S_Transcript_176935.p1 ORF type:5prime_partial len:149 (+),score=13.88,zf-RVT|PF13966.2|2e-08,zf-RVT|PF13966.2|3e+03 S_Transcript_176935:1-447(+)
GGAAAGATTAACACCAATGATGTGCGGCAACGTAGGCGACCTCAGTGGAATCTTTCGCTTGATATGTGTTTCATGTGTCATAGGAGTGGGGAGACAGCTTCTCACCTTTTTCTCCATTGTCCTGTTGCACATTCTTTGTGGGCTATGCTCTTTGATGTCCGGGGGGAAGCTTTTGTATGCCCGTCCACTGTTATGGAGTTCCTGGAGGTTTGCTATAGGGGGTTTGGTAGGGATAAAGAGTTGGGTGTGTTATGGCGTAATGTGATCTTTGCTACTCTGTGGTGTATTTGGTTTGAGCGCAATGCTAGGGTGTTTCAACAGATTGCTCTCCCTTCATCTCTTATGTGGGAGCGGATCACCTACTTAGCATCCTTGTGGAGTAAAGCTAGTGGGGCGTTTCGTAGTTATTCTTTATCTGATCTACAACGTAATTGGTCATGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_176935.p1 GENE.S_Transcript_176935~~S_Transcript_176935.p1 ORF type:5prime_partial len:149 (+),score=13.88,zf-RVT|PF13966.2|2e-08,zf-RVT|PF13966.2|3e+03 S_Transcript_176935:1-447(+)
GKINTNDVRQRRRPQWNLSLDMCFMCHRSGETASHLFLHCPVAHSLWAMLFDVRGEAFVCPSTVMEFLEVCYRGFGRDKELGVLWRNVIFATLWCIWFERNARVFQQIALPSSLMWERITYLASLWSKASGAFRSYSLSDLQRNWSCL*

Click here to download the sequence:
Link to NCBI Protein BLAST