Transcript Information: S_Transcript_17694.p1


Annotated TAIR IDAT5G42940.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17216649-17219171 | Reverse length=691
E-Value1.6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.722821047705
Replicate 224.278172828077
Replicate 326.865003456029
Condition 2: 8 Hour
Replicate 126.840071719638
Replicate 226.218452601165
Replicate 326.124374437467
Condition 3: 24 Hour
Replicate 128.395343739493
Replicate 223.817265535529
Replicate 325.291431047221


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17694.p1 GENE.S_Transcript_17694~~S_Transcript_17694.p1 ORF type:complete len:727 (+),score=161.74,zf-RING_2|PF13639.2|1.3e-11,zf-rbx1|PF12678.3|1.8e-09,zf-C3HC4|PF00097.21|2.7e-06,zf-RING_11|PF17123.1|1.5e-05 S_Transcript_17694:482-2662(+)
ATGCAAGGGCAGAAGAGTGCTATTGGCTCGCTACCTGATTCGATAAATTTTGATTATGCGTCCTCATCGAGCAATGTGGGTGTAGACCAGCAAATTTGCTGGAACAATCTAAGAAATCCTGCTGAAAGCAGATTGTCTGATTTTAGGATGTCAGCTAGCAGTTCAGATGCTTTTATGGGCACTGTTGCTCAAGAAGGGCAAGGCTTGAGAAAGTGGAGTACCGGTGAATCAAGTTCTAGCAATCCACAAAACGAGGTTGGCCATAATGAACGAATGCCTCCAAGTGGATGGGCACCTTCAATGACTGCATCTGCTGGTGCTGGTTTGAGGTTGGAGGAGCAACATGGTAATGCTACCAATCTTGCTTCACAGCCTGGTATTAACTTGAACCTTAGCAACAATCAAATTGTTAGTGGCCCTGCATTTGTGCAAAGTTCAAACTCCAGTCCGGCTTCACAATATCAAGATGTAAATGAAGGAAGGTTTAATAGAGTTGGTGGTGATTTAGATTGTCCCAATTCTTCTAAAGGTATAGGATTTGAAAGTAAATTCATTTCTTCATCTAGTAGTTCATCTGATCCCTTTGCTTCGTCATCTGGAAGTGGTGGTTTCCTAGTGGAAAAGGATGATGGTAGGCCTGGTTGCTCGTTGGATAGTCGCCGTCAGTCATGTAAGAGGAAAAATCTTGAAAGAAATGGTGGACAGTCTTCTAGTGATGGAGGGTCCATGTCAAGGGCTGAAAGTGGCATGTGGCATGCTGCTCCTCCCCAGTACAATGCTGGTAGTAGCGTAATTGGATCTGCCACATCTGAAATTTCTCCTAGCATTAGCTCTCCTGAACAAGTCAATGCGAGACTTGGATTATACATGGGTGTGGGAGTTTCTGCTGATAATCTTCGCTCTTTGAATGGGCATGGACGACCAGATATTTCGCACAGGAATCACCGTTTGAGGATGAATCCGTCAGTTCAGCTAGAATCTATGCCAAATAATTCCATTTTGCCTGCTCCAACTTCTGGTGGTGGGCATCCTGAAATTCGTTCTGTACGTCATCCATTAAGAATTGTAAATCCTCCTATAGACTTAATGTCACCAATTCCGGCGGACAACTCAGTTCCACTGAGTCAGTCTGTAACATTGCGTGTACCTACATTGCAGCGCAATATGCAAGCTGTTAGGTGGAATGGCGGTCCTAATTTGAGACCTGGAAATTCATCTGGTTCTGCCTTATCCGGAGAGAGAGATGGCGCAGAAGATTTGAACCCTAGGAATGTGCCAAGAAATATTGCAGAACACCCTATGTTTGTGCCTCCAGTTGAGGCAAGCGTTTCAGCTCAAAATCCAGCAAACTGGAGTCCGAGTAATGGTAATGTAGGTACGTCTAGAAACATGGCATCAAGTTCTCGTACTGGGTCAGGTTCTGGTTCCCACTCCTCACCCGGGCCTAGTTGGGTTTCACATCGCCATCCTCCGTCACAGTACTCAAGGAGATTGTCTGAGTATGTTCGTAGATCATTATTGTCTCCTGTTGGACCTGATGTCGCAGGTCAGAGTAGCACCAATAGCCAAAATCACTTGGGTCCATCTTCCTCACAAGAAGGCATACTTCCCCCTGGTGGAGCCCAGGGACATAGTCAATCACACTCTAGGTCAGCCATGTGGCTTGAAAGGCAAGGTGATGGTGCGGTTGGACTTCCTTATTCCTTGCGAGCTTTAGCAGTGGCTGGTGAAGGAAGAAGCAGACTCGTGTCTGAGATCCGCAATGTTCTGGATATTATGCGGAGGGGTGAAGCATTACGATTTGAGGATTTTATGCTCCTTGACCAGTCTGTATTTTTCGGAATGGCTGATATTCATGATCAGCATCGGGACATGCGGCTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTCTGGAAGAGCGCATTGGAAACGTGTGCACTGGGTTGAGTGAAGAGATGATCTTGTCACGTATGAAGCAGCGCAAGCATGTACATACTATGAGCGATGAACAGATGGAGGCAGAGCCTTGCTGTGTTTGTCAGGAAAATTACAATGACGGGGATGAACTTGGGACCCTGGATTGTGGACATGATTTCCACACCCACTGTATTAAACAGTGGCTGGAGCAGAAGAATTTGTGCCCTATCTGTAAAACAACAGCCCTAGCCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17694.p1 GENE.S_Transcript_17694~~S_Transcript_17694.p1 ORF type:complete len:727 (+),score=161.74,zf-RING_2|PF13639.2|1.3e-11,zf-rbx1|PF12678.3|1.8e-09,zf-C3HC4|PF00097.21|2.7e-06,zf-RING_11|PF17123.1|1.5e-05 S_Transcript_17694:482-2662(+)
MQGQKSAIGSLPDSINFDYASSSSNVGVDQQICWNNLRNPAESRLSDFRMSASSSDAFMGTVAQEGQGLRKWSTGESSSSNPQNEVGHNERMPPSGWAPSMTASAGAGLRLEEQHGNATNLASQPGINLNLSNNQIVSGPAFVQSSNSSPASQYQDVNEGRFNRVGGDLDCPNSSKGIGFESKFISSSSSSSDPFASSSGSGGFLVEKDDGRPGCSLDSRRQSCKRKNLERNGGQSSSDGGSMSRAESGMWHAAPPQYNAGSSVIGSATSEISPSISSPEQVNARLGLYMGVGVSADNLRSLNGHGRPDISHRNHRLRMNPSVQLESMPNNSILPAPTSGGGHPEIRSVRHPLRIVNPPIDLMSPIPADNSVPLSQSVTLRVPTLQRNMQAVRWNGGPNLRPGNSSGSALSGERDGAEDLNPRNVPRNIAEHPMFVPPVEASVSAQNPANWSPSNGNVGTSRNMASSSRTGSGSGSHSSPGPSWVSHRHPPSQYSRRLSEYVRRSLLSPVGPDVAGQSSTNSQNHLGPSSSQEGILPPGGAQGHSQSHSRSAMWLERQGDGAVGLPYSLRALAVAGEGRSRLVSEIRNVLDIMRRGEALRFEDFMLLDQSVFFGMADIHDQHRDMRLDVDNMSYEELLALEERIGNVCTGLSEEMILSRMKQRKHVHTMSDEQMEAEPCCVCQENYNDGDELGTLDCGHDFHTHCIKQWLEQKNLCPICKTTALAT*

Click here to download the sequence:
Link to NCBI Protein BLAST