Transcript Information: S_Transcript_17716.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value3.2E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7178449719873
Replicate 23.5343303660096
Replicate 36.2669491546215
Condition 2: 8 Hour
Replicate 18.9028328508419
Replicate 29.7741086290068
Replicate 39.2092739652589
Condition 3: 24 Hour
Replicate 17.6351049093339
Replicate 26.8211471734638
Replicate 35.1423585680334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17716.p1 GENE.S_Transcript_17716~~S_Transcript_17716.p1 ORF type:complete len:206 (+),score=42.06,DUF1990|PF09348.6|2.2e-41 S_Transcript_17716:414-1031(+)
ATGGTTTTCTTATGTTGGACTCGCCCTTCTCCTAAGGATCAAAAGGCTTGTTTGGAGAAGACCGGTTCCTTCAATCACAACTCTAAGCATAAGGGAGCTGCAGCTATGTCAGCATCTTCTCTTCAGGATGATAAGCAGCTCTCAGGGGATGGTTTTTTCCTCAATCATGCTCGTGTCTTGATTGGTTCTGGGCTAGATACATATGAGAAGGGAAAGGATGCACTTCAAAATTGGAGGCATTTCCAAATGAAATGGACATTTGTTGAGCCGACAACTCCTATTAAAAGTGGGGCGAAGTTTTGTGTTTGTGTCAAGGAGTTCCTACCGTGGTTGATGATGCCCCTTCAAGTGGTGTATATTAATGAGAAAAGGAGCGCTGGGAAGGTGAAAGCCTCCTTCAGCTTTGGTAGTGGCACCCTTCAAGGGCACCTACTGGCTGGGGAAGAGCGCTTTTCAGTCGAGCTGGATGAGAACAATCAAGTTTGGTATGAAATACTTTCCTTTTCAAAGCCTGCACATTTTCTTTCGTTTATCGGATATCAATATGTACAGTTTAGACAAAAGTATTTTGCGAAGGAGTCAACAGATGCTGTATTGAAACATCTATCTGCTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17716.p1 GENE.S_Transcript_17716~~S_Transcript_17716.p1 ORF type:complete len:206 (+),score=42.06,DUF1990|PF09348.6|2.2e-41 S_Transcript_17716:414-1031(+)
MVFLCWTRPSPKDQKACLEKTGSFNHNSKHKGAAAMSASSLQDDKQLSGDGFFLNHARVLIGSGLDTYEKGKDALQNWRHFQMKWTFVEPTTPIKSGAKFCVCVKEFLPWLMMPLQVVYINEKRSAGKVKASFSFGSGTLQGHLLAGEERFSVELDENNQVWYEILSFSKPAHFLSFIGYQYVQFRQKYFAKESTDAVLKHLSAD*

Click here to download the sequence:
Link to NCBI Protein BLAST