Transcript Information: S_Transcript_17717.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value9E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 210.819252571474
Replicate 33.1920120144693
Condition 2: 8 Hour
Replicate 115.583939077905
Replicate 27.0987596645286
Replicate 310.452963729366
Condition 3: 24 Hour
Replicate 15.4612208726485
Replicate 25.2301103637725
Replicate 36.0629914435375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17717.p1 GENE.S_Transcript_17717~~S_Transcript_17717.p1 ORF type:complete len:104 (+),score=18.35,DUF1990|PF09348.6|1.5e-08 S_Transcript_17717:202-513(+)
ATGCTTTCTCTATATTGGACTCGTCCATCTCCCAGTGATCAAAAAGCTTGCTTGGATAAGGCTGGGTCCTTAAATTTCGAATTTAAATATAAAGGAGAAACAGCTAGGTCATTATCTTCTCTGCAGGAAGATAAGCAGCTCTCAAGGGAGGGTTTCTTCCTCAATCATGCTCGAATTAAGCTTGGTTCTGGGATAGAGACATATGAGAAAGCAAAGAATGCACTTCAAAATTGGAGGCATCATGATATGAGTTGGATGTTTGTTGAGCCTGCGAGCCAGATTGTGCGAGGCAGATGGTACCATGGGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17717.p1 GENE.S_Transcript_17717~~S_Transcript_17717.p1 ORF type:complete len:104 (+),score=18.35,DUF1990|PF09348.6|1.5e-08 S_Transcript_17717:202-513(+)
MLSLYWTRPSPSDQKACLDKAGSLNFEFKYKGETARSLSSLQEDKQLSREGFFLNHARIKLGSGIETYEKAKNALQNWRHHDMSWMFVEPASQIVRGRWYHGL*

Click here to download the sequence:
Link to NCBI Protein BLAST