Transcript Information: S_Transcript_17718.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2013036185464
Replicate 25.5156973893787
Replicate 32.5505911604979
Condition 2: 8 Hour
Replicate 18.0537378325343
Replicate 23.4509766518727
Replicate 35.5557262374685
Condition 3: 24 Hour
Replicate 12.4401199643749
Replicate 22.7727003524255
Replicate 31.2074382959896


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17718.p1 GENE.S_Transcript_17718~~S_Transcript_17718.p1 ORF type:3prime_partial len:188 (+),score=29.41,DUF1990|PF09348.6|9.4e-33 S_Transcript_17718:202-762(+)
ATGCTTTCTCTATATTGGACTCGTCCATCTCCCAGTGATCAAAAAGCTTGCTTGGATAAGGCTGGGTCCTTAAATTTCGAATTTAAATATAAAGGAGAAACAGCTAGGTCATTATCTTCTCTGCAGGAAGATAAGCAGCTCTCAAGGGAGGGTTTCTTCCTCAATCATGCTCGAATTAAGCTTGGTTCTGGGATAGAGACATATGAGAAAGCAAAGAATGCACTTCAAAATTGGAGGCATCATGATATGAGTTGGATGTTTGTTGAGCCTACGACCCAGATTGAAAGTGGGCAGAAGTTTTGTGTTTGTGCGAGGCAGATGGTACCATGGGTTATGATACCCTCTGAAGTGGTGTATGTTAATGAGAAAAAGAATGTTGACAACGTAAAAACTTCCTTCAGCTTTGCTATTAGTAGTCTTCAAGGTTCCCTACTGGCCGGTGAAGAACGCTTTTCAGTTGAATTGGATGACAACGGTCAAGTTTGGTATGAAGTCCTTTCCTTGTCGAAAGCCGCAGGAAATTTACTTTCTTTAATTCTGTATCCGTTGGTAAAGTATTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17718.p1 GENE.S_Transcript_17718~~S_Transcript_17718.p1 ORF type:3prime_partial len:188 (+),score=29.41,DUF1990|PF09348.6|9.4e-33 S_Transcript_17718:202-762(+)
MLSLYWTRPSPSDQKACLDKAGSLNFEFKYKGETARSLSSLQEDKQLSREGFFLNHARIKLGSGIETYEKAKNALQNWRHHDMSWMFVEPTTQIESGQKFCVCARQMVPWVMIPSEVVYVNEKKNVDNVKTSFSFAISSLQGSLLAGEERFSVELDDNGQVWYEVLSLSKAAGNLLSLILYPLVKYS

Click here to download the sequence:
Link to NCBI Protein BLAST