Transcript Information: S_Transcript_177254.p1


Annotated TAIR IDAT2G42840.1
Annotated Gene Nameprotodermal factor 1
Annotated Gene Symbol(s)PDF1
Annotation TypeOrtholog
Chromosome Positionchr2:17826327-17827426 | Reverse length=306
E-Value2.8E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2194843776288
Replicate 23.2859473809065
Replicate 32.0600928604022
Condition 2: 8 Hour
Replicate 12.6089573260322
Replicate 21.6659887284903
Replicate 31.700732521674
Condition 3: 24 Hour
Replicate 10.46478475511903
Replicate 22.169939406246
Replicate 31.7440775386517


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177254.p1 GENE.S_Transcript_177254~~S_Transcript_177254.p1 ORF type:internal len:188 (-),score=31.95 S_Transcript_177254:2-562(-)
TATTATGGGCCACCTAGTCCTAGCACTCCAGTGATTGTGACTCCCCCAAGTCCACTGGTCCCTTCATCACCACCTAGTCACGGCGGCGGTGGCGGTGGCGGTGGGTATTATGGGCCACCTAGTCCTAGCACTCCAGTGATTGTGACTCCCCCAAGTCCACTGGTCCCTTCACCACCGTATGTGAGCCCCATTACTCCGATTGTGCCATCTCCTCTTGTTCCACGTACTCCTCCTCCCTCTGATCCTAATTGCCCTCCTTTTCCATGCACGTATTGGGGAAGCCACCCAACCCTAATATTTGGTGTACTAGGATGGTGGGCCACAGTGAGAGGATTATTTGGAGTAACAACATTGCCAGAACTAACCAGAGCAGATTACAGCCTACAACAAATACTAATGAGCCCACGAAAAGATGGCTATGGATCTCTGTACAGAGAAGCCACAGCTGCTGTCCTCAACTCCATGGCCATCAAAGACCCTAAAGACTTCCCTTTCTCCACCAAACACGTCAGAGACGCCTTCGTCGCTTCTCTCTCCTCCGACAAAGCCGCCGCCGCTCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177254.p1 GENE.S_Transcript_177254~~S_Transcript_177254.p1 ORF type:internal len:188 (-),score=31.95 S_Transcript_177254:2-562(-)
YYGPPSPSTPVIVTPPSPLVPSSPPSHGGGGGGGGYYGPPSPSTPVIVTPPSPLVPSPPYVSPITPIVPSPLVPRTPPPSDPNCPPFPCTYWGSHPTLIFGVLGWWATVRGLFGVTTLPELTRADYSLQQILMSPRKDGYGSLYREATAAVLNSMAIKDPKDFPFSTKHVRDAFVASLSSDKAAAAQ

Click here to download the sequence:
Link to NCBI Protein BLAST