Transcript Information: S_Transcript_177269.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27156123709368
Replicate 20
Replicate 30.56457355357961
Condition 2: 8 Hour
Replicate 10.21760602364421
Replicate 20
Replicate 30.65252594709127
Condition 3: 24 Hour
Replicate 10
Replicate 20.46252676686423
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177269.p1 GENE.S_Transcript_177269~~S_Transcript_177269.p1 ORF type:5prime_partial len:98 (+),score=11.72,zf-RVT|PF13966.2|8.2e-18 S_Transcript_177269:2-295(+)
TATGATTGGTTGATTAGTTCTTCTGCTGGTAATTGCAATACAAATACAATCTGGGATACTGCTATCATTCCTAAACATCAGGTGGCAGTATGGATGGCATGGAGAAGAGCTTTGCCTACTGTTGATTTATTATGCTCAAGGGGTATCATGTTGGTAAACAGGTGCGAATTATGCCAGACAGCACTGGAGACACATGAGCACTTGTTTTTCCAATGTCCTACCTCATTTGCTATTTGGAGCAGAGTTCTTCAGTGGCTTGGATACAATAGAAGAGTAAGAGGCTATAGTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177269.p1 GENE.S_Transcript_177269~~S_Transcript_177269.p1 ORF type:5prime_partial len:98 (+),score=11.72,zf-RVT|PF13966.2|8.2e-18 S_Transcript_177269:2-295(+)
YDWLISSSAGNCNTNTIWDTAIIPKHQVAVWMAWRRALPTVDLLCSRGIMLVNRCELCQTALETHEHLFFQCPTSFAIWSRVLQWLGYNRRVRGYSL*

Click here to download the sequence:
Link to NCBI Protein BLAST