Transcript Information: S_Transcript_177296.p1


Annotated TAIR IDAT3G57080.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)RPB5B, NRPE5
Annotation TypeHomolog
Chromosome Positionchr3:21125878-21127470 | Forward length=222
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3697541882038
Replicate 25.0914129748111
Replicate 35.9584224270094
Condition 2: 8 Hour
Replicate 15.7414512392281
Replicate 28.2603748823606
Replicate 36.5587223399943
Condition 3: 24 Hour
Replicate 15.5452396553047
Replicate 25.0557733516467
Replicate 32.7162201667048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177296.p1 GENE.S_Transcript_177296~~S_Transcript_177296.p1 ORF type:5prime_partial len:130 (+),score=5.16 S_Transcript_177296:1-390(+)
CAAAAATTTCATAGGCTTTTTTTAAGATATCTTGTACTTTTTACCACGAAAGCGAGGAGAACGCAACAAAGATTCAGTGGCTTATTAATCGGCATCACAAAGCATCTCTTATCACCAAAACATGAGGTGCTAACAATCGAGGAAAAGGAATTTCTATCACAGAAGTATCAAGTGGAGGATCATGAGGAGCCTTTACACCATGTTGTTGCTCGTCCTTCTTCAGACGACATTCTTGAATGGTGTAAGTTTTGTTTCAACAGTCCTTCTTTGAAGGAGGGGTGCTTCCCTCAATCTACTCATGCAACTGGTGTAGCTATAGTTTACGCATTTGTTATCTGTACAAACATTATCATCCTCTTTTTCGTAGTTTTTACAAATAGGTTCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177296.p1 GENE.S_Transcript_177296~~S_Transcript_177296.p1 ORF type:5prime_partial len:130 (+),score=5.16 S_Transcript_177296:1-390(+)
QKFHRLFLRYLVLFTTKARRTQQRFSGLLIGITKHLLSPKHEVLTIEEKEFLSQKYQVEDHEEPLHHVVARPSSDDILEWCKFCFNSPSLKEGCFPQSTHATGVAIVYAFVICTNIIILFFVVFTNRFN*

Click here to download the sequence:
Link to NCBI Protein BLAST