Transcript Information: S_Transcript_177579.p2


Annotated TAIR IDAT5G23430.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7894073-7899862 | Reverse length=837
E-Value4.5E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7649871413174
Replicate 23.151827079645
Replicate 32.5548378990269
Condition 2: 8 Hour
Replicate 11.8463541400115
Replicate 22.324347910621
Replicate 33.0451210864259
Condition 3: 24 Hour
Replicate 12.9315644511187
Replicate 21.5697878148119
Replicate 34.2582672372274


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177579.p2 GENE.S_Transcript_177579~~S_Transcript_177579.p2 ORF type:complete len:231 (+),score=33.58,WD40|PF00400.28|9.4e-05,WD40|PF00400.28|0.00032,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|2.1e-11,WD40|PF00400.28|0.36,eIF2A|PF08662.7|0.0041,eIF2A|PF08662.7|0.026 S_Transcript_177579:542-1234(+)
ATGACGACTAAGCGTGCTTATAAGCTGCAGGAATTTGTAGCTCATACTTCCACAGTCAACTGCCTGAAGATCGGGAGGAAGTCTTCTCGTGTTTTGGTTACTGGAGGAGAGGACCACAAGGTCAATCTTTGGGCTATTGGAAAACCCAATGCCATACTGAGTTTGTCAGGTCACTCAAGTGGGATTGATTCGGTAGGCTTTGATTCTTCCGAGGTTTTGGTCGCTGCAGGAGCTGCAAGTGGAACTATCAAGCTTTGGGATCTAGAAGAGGCAAAGATTGTTCGCACTCTCACTGGCCATAGATCCAACTGTATATCCGTGGACTTCCATCCCTTTGGAGAGTTCTTTGCATCTGGATCTTTGGACACAAATCTAAAAATATGGGATATTAGAAGGAAGGGGTGTATCCACACTTACAAAGGCCACACACGAGGAGTCAATGCAATTAGGTTTACTCCAGATGGGCGCTGGGTTGTGTCTGGCGGTGAGGACAACACTGTCAAGCTTTGGGATTTGACGGCCGGCAAGCTATTACATGATTTCAAGTCTCATGAGGGGCAGATTCAGTGCATAGATTTTCATCCGCACGAGTTCCTTTTGGCAACAGGTTCAGTATGCTCCTGTCCAGTGAAACTTTATTTTCTAATTTTTTGTGTTTGCAGTCAGAATTCCATGTTGAATTTATTAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177579.p2 GENE.S_Transcript_177579~~S_Transcript_177579.p2 ORF type:complete len:231 (+),score=33.58,WD40|PF00400.28|9.4e-05,WD40|PF00400.28|0.00032,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|2.1e-11,WD40|PF00400.28|0.36,eIF2A|PF08662.7|0.0041,eIF2A|PF08662.7|0.026 S_Transcript_177579:542-1234(+)
MTTKRAYKLQEFVAHTSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPHEFLLATGSVCSCPVKLYFLIFCVCSQNSMLNLLA*

Click here to download the sequence:
Link to NCBI Protein BLAST