Transcript Information: S_Transcript_177584.p1


Annotated TAIR IDAT5G23430.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7894073-7899862 | Reverse length=837
E-Value1.9e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.72832638704
Replicate 210.714638124686
Replicate 312.157009553235
Condition 2: 8 Hour
Replicate 111.953932899367
Replicate 213.182912057367
Replicate 313.172714812067
Condition 3: 24 Hour
Replicate 110.227005379492
Replicate 210.610398678065
Replicate 311.052356537073


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177584.p1 GENE.S_Transcript_177584~~S_Transcript_177584.p1 ORF type:complete len:801 (+),score=153.15,Katanin_con80|PF13925.2|2.3e-51,WD40|PF00400.28|0.00049,WD40|PF00400.28|0.0017,WD40|PF00400.28|7.1e-06,WD40|PF00400.28|1.1e-10,WD40|PF00400.28|1.3e-07,WD40|PF00400.28|1.4e+02,eIF2A|PF08662.7|0.022,eIF2A|PF08662.7|0.00025,eIF2A|PF08662.7|0.034 S_Transcript_177584:541-2943(+)
ATGACGACTAAGCGTGCTTATAAGCTGCAGGAATTTGTAGCTCATACTTCCACAGTCAACTGCCTGAAGATCGGGAGGAAGTCTTCTCGTGTTTTGGTTACTGGAGGAGAGGACCACAAGGTCAATCTTTGGGCTATTGGAAAACCCAATGCCATACTGAGTTTGTCAGGTCACTCAAGTGGGATTGATTCGGTAGGCTTTGATTCTTCCGAGGTTTTGGTCGCTGCAGGAGCTGCAAGTGGAACTATCAAGCTTTGGGATCTAGAAGAGGCAAAGATTGTTCGCACTCTCACTGGCCATAGATCCAACTGTATATCCGTGGACTTCCATCCCTTTGGAGAGTTCTTTGCATCTGGATCTTTGGACACAAATCTAAAAATATGGGATATTAGAAGGAAGGGGTGTATCCACACTTACAAAGGCCACACACGAGGAGTCAATGCAATTAGGTTTACTCCAGATGGGCGCTGGGTTGTGTCTGGCGGTGAGGACAACACTGTCAAGCTTTGGGATTTGACGGCCGGCAAGCTATTACATGATTTCAAGTCTCATGAGGGGCAGATTCAGTGCATAGATTTTCATCCGCACGAGTTCCTTTTGGCAACAGGTTCTGCTGATAAAACAGTGAAATTCTGGGACCTTGAGACTTTTGAGCTTATTGGTTCAGCAGGGCCTGAGACCTCCGGAGTGCGTTGTATGACCTTTAATCCCGATGGAAGGACCCTACTTTCTGGATTGCATGAAAGCTTAAAGGTCTATTCTTGGGAACCCATACGTTGCTACAATACAGTGGATGTTGGATGGTCTAGGTTGTCAGATCTTAATATCCACGAGGGAAAGCTTCTTGGCTGCTCATATAATCAGAGCTGTGTTGGAGTGTGGGTGGTGGACATCTCGCGGATAGAGCCATATTCAGTTCGAATGCATTCCAATGGCCATTCAGATTCCAAGTCTACTTCATGTGGGAATTCGTCAGCGCTAACTGAAAACAATGCTAAGGTTGGCCGGCTACCAACATCTCAGAACAGCGATCCAGTAGAAAAAGAGACCAAATCTGCAGGAAGGGTTCAAACGTCCACAAACTCTAGCTGTGCAAATAAAGATTCCAAAGTCTCAGCAACCACTGTTGGAATGCCGGGGACCCCTCAGCGGGTCACTCTGAGCACCACTCCAAAGAATACAGTATCTGTAGCAGCAGTTTCTGGTACTATGGTCCAGAAAAGAAATTCCTTAAGGACCCAATCAGCTGCCAATGCTTGTACATTCAACAAATCTGATATTGTGCCCATCATTGTCCCGAGAAACGATGTAAAGTTGGAGCAGACAGCTGAATACAAGAGAGAATTTTTTTCCAGGAGAACTATTCCTCATCCTTCACAGTCAAAATTTACTGACTTGCGAAGAATTTCAAATGCCAGTGAAGAATCTGATGGATCATCCATCTGTGTCCAACCAGAGCCCACAAGCGTTAAGGCTTCAGAATTTGTTGGAGTCCCAAATAAGAGTATATTACCTGCAGTTAGGAACCTCAATATTAGTCTTCCTGTTTCAGAAAGGAACATGAAGGACGACAAATGTGCTGGCTCTGTGAAGGTTGAAAATAATTCCTCATTACAGCCTCTTGCCAGCTGCCAATATGAAGCTTATGAAATACGTTTGCCTAAATCAACCAAAGATGCCAACTCTTTAGAATTCCAGCGTTCTGTGAAAACACGCTCTTTGGTTGCAAACTGGGAGAAAAAAGAGAGATCTCCTACATTTGAGGGTTCTGCTTCAAGCAATGCTGCTGCTATTATGATCAATGTTGATTCAAGTGCTCTTAGTATGAAGTCAAAACATGGGTACTCTTTATCAGTTGAAAAAGACGCAACTTCTCTTACTGATGATGATGTTATTGCTGAGATAACTGGGAGACATAATCAATTTCTTAGTTCCATGCAATCACGCCTGGATAAATTACAGGTAGTGCATAGACTTTGGGATCGAAATGATATCAAAGGTGCTATTGGTGCTATGGAAAAGATGGCAGACCGTGGGGTTGTTGCTGAAGTAGTTAGCTTTCTGACAGAAAAAATTGACATCATTACATTGGAAATTTGCACATATCTCCTGCCGCTTCTTGCAAGCCTTCTTGAAAGTGACATGGATAGGCATCTAGGTATTTCACTGGATATGTTGATTAAGCTTGTCAGAGTATTTGGTTCAGTCATTCATTCAGCAATATCAGCGTCATCCTCTGTGGGTGTAGATATTGAGGCAGAGGAAAGATTGGAGCGTTGCAACCTCTGTTATATTGAACTTGAAAGGGTTAAACGTTGCCTGCCTGCTCTAATGAGAAGAGGGGGTGCAGTAGCAAAGTCTGCACAGGAGCTGAATCTAGCGCTGAATGCAACTTGTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177584.p1 GENE.S_Transcript_177584~~S_Transcript_177584.p1 ORF type:complete len:801 (+),score=153.15,Katanin_con80|PF13925.2|2.3e-51,WD40|PF00400.28|0.00049,WD40|PF00400.28|0.0017,WD40|PF00400.28|7.1e-06,WD40|PF00400.28|1.1e-10,WD40|PF00400.28|1.3e-07,WD40|PF00400.28|1.4e+02,eIF2A|PF08662.7|0.022,eIF2A|PF08662.7|0.00025,eIF2A|PF08662.7|0.034 S_Transcript_177584:541-2943(+)
MTTKRAYKLQEFVAHTSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCMTFNPDGRTLLSGLHESLKVYSWEPIRCYNTVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEPYSVRMHSNGHSDSKSTSCGNSSALTENNAKVGRLPTSQNSDPVEKETKSAGRVQTSTNSSCANKDSKVSATTVGMPGTPQRVTLSTTPKNTVSVAAVSGTMVQKRNSLRTQSAANACTFNKSDIVPIIVPRNDVKLEQTAEYKREFFSRRTIPHPSQSKFTDLRRISNASEESDGSSICVQPEPTSVKASEFVGVPNKSILPAVRNLNISLPVSERNMKDDKCAGSVKVENNSSLQPLASCQYEAYEIRLPKSTKDANSLEFQRSVKTRSLVANWEKKERSPTFEGSASSNAAAIMINVDSSALSMKSKHGYSLSVEKDATSLTDDDVIAEITGRHNQFLSSMQSRLDKLQVVHRLWDRNDIKGAIGAMEKMADRGVVAEVVSFLTEKIDIITLEICTYLLPLLASLLESDMDRHLGISLDMLIKLVRVFGSVIHSAISASSSVGVDIEAEERLERCNLCYIELERVKRCLPALMRRGGAVAKSAQELNLALNATCE*

Click here to download the sequence:
Link to NCBI Protein BLAST