Transcript Information: S_Transcript_177585.p1


Annotated TAIR IDAT5G23430.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7894073-7899862 | Reverse length=837
E-Value1.8E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40890654906807
Replicate 20.93223054468372
Replicate 30.77927053874369
Condition 2: 8 Hour
Replicate 11.1195147285563
Replicate 20.74477345023418
Replicate 30.73691150490973
Condition 3: 24 Hour
Replicate 10.33564481675689
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177585.p1 GENE.S_Transcript_177585~~S_Transcript_177585.p1 ORF type:complete len:781 (+),score=150.53,Katanin_con80|PF13925.2|2.2e-51,WD40|PF00400.28|0.00048,WD40|PF00400.28|0.0016,WD40|PF00400.28|6.9e-06,WD40|PF00400.28|1.1e-10,WD40|PF00400.28|1.3e-07,WD40|PF00400.28|1.4e+02,eIF2A|PF08662.7|0.021,eIF2A|PF08662.7|0.00029,eIF2A|PF08662.7|0.034 S_Transcript_177585:542-2884(+)
ATGACGACTAAGCGTGCTTATAAGCTGCAGGAATTTGTAGCTCATACTTCCACAGTCAACTGCCTGAAGATCGGGAGGAAGTCTTCTCGTGTTTTGGTTACTGGAGGAGAGGACCACAAGGTCAATCTTTGGGCTATTGGAAAACCCAATGCCATACTGAGTTTGTCAGGTCACTCAAGTGGGATTGATTCGGTAGGCTTTGATTCTTCCGAGGTTTTGGTCGCTGCAGGAGCTGCAAGTGGAACTATCAAGCTTTGGGATCTAGAAGAGGCAAAGATTGTTCGCACTCTCACTGGCCATAGATCCAACTGTATATCCGTGGACTTCCATCCCTTTGGAGAGTTCTTTGCATCTGGATCTTTGGACACAAATCTAAAAATATGGGATATTAGAAGGAAGGGGTGTATCCACACTTACAAAGGCCACACACGAGGAGTCAATGCAATTAGGTTTACTCCAGATGGGCGCTGGGTTGTGTCTGGCGGTGAGGACAACACTGTCAAGCTTTGGGATTTGACGGCCGGCAAGCTATTACATGATTTCAAGTCTCATGAGGGGCAGATTCAGTGCATAGATTTTCATCCGCACGAGTTCCTTTTGGCAACAGGTTCTGCTGATAAAACAGTGAAATTCTGGGACCTTGAGACTTTTGAGCTTATTGGTTCAGCAGGGCCTGAGACCTCCGGAGTGCGTTGTATGACCTTTAATCCCGATGGAAGGACCCTACTTTCTGGATTGCATGAAAGCTTAAAGGTCTATTCTTGGGAACCCATACGTTGCTACAATACAGTGGATGTTGGATGGTCTAGGTTGTCAGATCTTAATATCCACGAGGGAAAGCTTCTTGGCTGCTCATATAATCAGAGCTGTGTTGGAGTGTGGGTGGTGGACATCTCGCGGATAGAGCCATATTCAGTTCGAATGCATTCCAATGGCCATTCAGATTCCAAGTCTACTTCATGTGGGAATTCGTCAGCGCTAACTGAAAACAATGCTAAGGTTGGCCGGCTACCAACATCTCAGAACAGCGATCCAGTAGAAAAAGAGACCAAATCTGCAGGAAGGGTTCAAACGTCCACAAACTCTAGCTGTGCAAATAAAGATTCCAAAGTCTCAGCAACCACTGTTGGAATGCCGGGGACCCCTCAGCGGGTCACTCTGAGCACCACTCCAAAGAATACAGTATCTGTAGCAGCAGTTTCTGGTACTATGGTCCAGAAAAGAAATTCCTTAAGGACCCAATCAGCTGCCAATGCTTGTACATTCAACAAATCTGATATTGTGCCCATCATTGTCCCGAGAAACGATGTAAAGTTGGAGCAGACAGCTGAATACAAGAGAGAATTTTTTTCCAGGAGAACTATTCCTCATCCTTCACAGTCAAAATTTACTGACTTGCGAAGAATTTCAAATGCCAGTGAAGAATCTGATGGATCATCCATCTGTGTCCAACCAGAGCCCACAAGCGTTAAGGCTTCAGAATTTGTTGGAGTCCCAAATAAGAGTATATTACCTGCAGTTAGGAACCTCAATATTAGTCTTCCTGTTTCAGAAAGGAACATGAAGGACGACAAATGTGCTGGCTCTGTGAAGGTTGAAAATAATTCCTCATTACAGCCTCTTGCCAGCTGCCAATATGAAGCTTTGAAAACACGCTCTTTGGTTGCAAACTGGGAGAAAAAAGAGAGATCTCCTACATTTGAGGGTTCTGCTTCAAGCAATGCTGCTGCTATTATGATCAATGTTGATTCAAGTGCTCTTAGTATGAAGTCAAAACATGGGTACTCTTTATCAGTTGAAAAAGACGCAACTTCTCTTACTGATGATGATGTTATTGCTGAGATAACTGGGAGACATAATCAATTTCTTAGTTCCATGCAATCACGCCTGGATAAATTACAGGTAGTGCATAGACTTTGGGATCGAAATGATATCAAAGGTGCTATTGGTGCTATGGAAAAGATGGCAGACCGTGGGGTTGTTGCTGAAGTAGTTAGCTTTCTGACAGAAAAAATTGACATCATTACATTGGAAATTTGCACATATCTCCTGCCGCTTCTTGCAAGCCTTCTTGAAAGTGACATGGATAGGCATCTAGGTATTTCACTGGATATGTTGATTAAGCTTGTCAGAGTATTTGGTTCAGTCATTCATTCAGCAATATCAGCGTCATCCTCTGTGGGTGTAGATATTGAGGCAGAGGAAAGATTGGAGCGTTGCAACCTCTGTTATATTGAACTTGAAAGGGTTAAACGTTGCCTGCCTGCTCTAATGAGAAGAGGGGGTGCAGTAGCAAAGTCTGCACAGGAGCTGAATCTAGCGCTGAATGCAACTTGTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177585.p1 GENE.S_Transcript_177585~~S_Transcript_177585.p1 ORF type:complete len:781 (+),score=150.53,Katanin_con80|PF13925.2|2.2e-51,WD40|PF00400.28|0.00048,WD40|PF00400.28|0.0016,WD40|PF00400.28|6.9e-06,WD40|PF00400.28|1.1e-10,WD40|PF00400.28|1.3e-07,WD40|PF00400.28|1.4e+02,eIF2A|PF08662.7|0.021,eIF2A|PF08662.7|0.00029,eIF2A|PF08662.7|0.034 S_Transcript_177585:542-2884(+)
MTTKRAYKLQEFVAHTSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCMTFNPDGRTLLSGLHESLKVYSWEPIRCYNTVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEPYSVRMHSNGHSDSKSTSCGNSSALTENNAKVGRLPTSQNSDPVEKETKSAGRVQTSTNSSCANKDSKVSATTVGMPGTPQRVTLSTTPKNTVSVAAVSGTMVQKRNSLRTQSAANACTFNKSDIVPIIVPRNDVKLEQTAEYKREFFSRRTIPHPSQSKFTDLRRISNASEESDGSSICVQPEPTSVKASEFVGVPNKSILPAVRNLNISLPVSERNMKDDKCAGSVKVENNSSLQPLASCQYEALKTRSLVANWEKKERSPTFEGSASSNAAAIMINVDSSALSMKSKHGYSLSVEKDATSLTDDDVIAEITGRHNQFLSSMQSRLDKLQVVHRLWDRNDIKGAIGAMEKMADRGVVAEVVSFLTEKIDIITLEICTYLLPLLASLLESDMDRHLGISLDMLIKLVRVFGSVIHSAISASSSVGVDIEAEERLERCNLCYIELERVKRCLPALMRRGGAVAKSAQELNLALNATCE*

Click here to download the sequence:
Link to NCBI Protein BLAST