Transcript Information: S_Transcript_177664.p3


Annotated TAIR IDAT2G43290.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)MSS3
Annotation TypeHomolog
Chromosome Positionchr2:17991308-17991955 | Reverse length=215
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8196923921491
Replicate 21.3199959564325
Replicate 30.78815111468378
Condition 2: 8 Hour
Replicate 13.4630975728677
Replicate 22.4857609599696
Replicate 33.0971744383306
Condition 3: 24 Hour
Replicate 10.56012521770754
Replicate 21.3559545387558
Replicate 31.5090112037249


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177664.p3 GENE.S_Transcript_177664~~S_Transcript_177664.p3 ORF type:complete len:117 (+),score=15.28,EF-hand_1|PF00036.28|6.6e+03,EF-hand_1|PF00036.28|5.7e-07,EF-hand_1|PF00036.28|0.0048,EF-hand_6|PF13405.2|1.1e+04,EF-hand_6|PF13405.2|5e-06,EF-hand_6|PF13405.2|0.59,EF-hand_7|PF13499.2|2.4e-07,EF-hand_7|PF13499.2|22,EF-hand_8|PF13833.2|0.00029,EF-hand_8|PF13833.2|22 S_Transcript_177664:4625-4975(+)
ATGACACTATGCATATTGCTAAGTCTCCCTAGCATAGTAACACCAGCAAGTATGGCAGGGAGCTGGGGAGTCCTTCGGAAGGTTTTCCGAGCAGTTCCGAAACGCGAACAGAGTCCCCTAAGTGAAGACGAGCTGCGGAGGATTTTCATGGAGCAGGACAAGGATGGCGATGGTCATCTTAACAAGGACGATCTCAAGAAGGCTTTTCGTAGGCTTGGTTCCCGATTGCCTTGGTATCGAGCTGATCGAGCCATCCATTATACTGATATTGATGGAGATGGTTTCATTAACGAGCATGAGATTGATCATCTTGTTTCTTATGCTATTCATTATGGTTATAATCTCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177664.p3 GENE.S_Transcript_177664~~S_Transcript_177664.p3 ORF type:complete len:117 (+),score=15.28,EF-hand_1|PF00036.28|6.6e+03,EF-hand_1|PF00036.28|5.7e-07,EF-hand_1|PF00036.28|0.0048,EF-hand_6|PF13405.2|1.1e+04,EF-hand_6|PF13405.2|5e-06,EF-hand_6|PF13405.2|0.59,EF-hand_7|PF13499.2|2.4e-07,EF-hand_7|PF13499.2|22,EF-hand_8|PF13833.2|0.00029,EF-hand_8|PF13833.2|22 S_Transcript_177664:4625-4975(+)
MTLCILLSLPSIVTPASMAGSWGVLRKVFRAVPKREQSPLSEDELRRIFMEQDKDGDGHLNKDDLKKAFRRLGSRLPWYRADRAIHYTDIDGDGFINEHEIDHLVSYAIHYGYNLK*

Click here to download the sequence:
Link to NCBI Protein BLAST