Transcript Information: S_Transcript_177693.p1


Annotated TAIR IDAT5G04360.1
Annotated Gene Namelimit dextrinase
Annotated Gene Symbol(s)ATPU1, ATLDA, PU1, LDA
Annotation TypeOrtholog
Chromosome Positionchr5:1221566-1228399 | Forward length=965
E-Value7.7E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9271483653062
Replicate 24.3364793268219
Replicate 32.8618038750415
Condition 2: 8 Hour
Replicate 15.0739721789041
Replicate 27.6372862597687
Replicate 35.6597250537364
Condition 3: 24 Hour
Replicate 12.9377601935627
Replicate 24.2201580176647
Replicate 34.7834911802806


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177693.p1 GENE.S_Transcript_177693~~S_Transcript_177693.p1 ORF type:internal len:290 (+),score=61.38,Alpha-amylase|PF00128.20|0.0047,Alpha-amylase|PF00128.20|0.0061 S_Transcript_177693:1-867(+)
CCTTCTTTATCTGACATCAGTGTGTATGAACTACATATAAGAGATTTCAGTGCAAATGATCCTACTGTGCATCCTGACCTTCGTGGCGGATATTTAGCTTTTACATCACAGGATTCAGCTGGTATTCTTCATCTGAAGAAGTTATCTGGTTCTGGTCTTACTCATGTGCATCTGCTACCGAGCTTCCATTTTGCTGAAGTTGATGATGACAAACAGAAATGGAAATCTGTCGATACTAAGGTGCTGGAATCACTACCACCTGATTCAGAAGAGCAACAAGCTCAAATTACTGCCATCCGAGATGAGGATGGGTTTAACTGGGGGTATAATCCTGTTTTGTGGGGGACCCCGAAGGGAAGTTATGCCACAGACCCCAATGGTCCATGTTGTATAATTGAGTTCAGAAAGATGGTTCAGGCACTAAATCGTATCGGCCTTCGTGTTGTACTGGATGTTGTGTATAACCACTTAAGTAGCAGTGGGCCATTTGGTGAGAATTCTGTCCTTGACAAGATTGTTCCAGGTTACTATCTAAGAAGGGATGCAGATGGTGTTATTGAGAATAGCACATGTATGAATAACACTGCTAGCGAACATTACATGGTTGAACGACTTATTGTGGATGATCTTCTATCTTGGGTGGTCAATTACAAGGTTGATGGATTCAGATTTGATCTTATGGGGCACATTATGAAACATACTATGGTGAAGGCAAAAAGCTTGATTGAAAGCTTCTCAAAAGCCAGAGATGGGGTGGAGGGTTTGAGCATCTATTTATATGGCGAAGGATGGGACTTTGGTGAGGTTGCCCAAAATGCACGTGGGGTAAATGCATCTCAATTGAATCTTGGTGGAACAGGAATTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177693.p1 GENE.S_Transcript_177693~~S_Transcript_177693.p1 ORF type:internal len:290 (+),score=61.38,Alpha-amylase|PF00128.20|0.0047,Alpha-amylase|PF00128.20|0.0061 S_Transcript_177693:1-867(+)
PSLSDISVYELHIRDFSANDPTVHPDLRGGYLAFTSQDSAGILHLKKLSGSGLTHVHLLPSFHFAEVDDDKQKWKSVDTKVLESLPPDSEEQQAQITAIRDEDGFNWGYNPVLWGTPKGSYATDPNGPCCIIEFRKMVQALNRIGLRVVLDVVYNHLSSSGPFGENSVLDKIVPGYYLRRDADGVIENSTCMNNTASEHYMVERLIVDDLLSWVVNYKVDGFRFDLMGHIMKHTMVKAKSLIESFSKARDGVEGLSIYLYGEGWDFGEVAQNARGVNASQLNLGGTGIG

Click here to download the sequence:
Link to NCBI Protein BLAST