Transcript Information: S_Transcript_177749.p1


Annotated TAIR IDAT5G20610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6969184-6972794 | Forward length=1164
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42242859103461
Replicate 20.17510150442472
Replicate 30.14637092129842
Condition 2: 8 Hour
Replicate 11.3539930360084
Replicate 21.5979891885519
Replicate 30.16917339369033
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177749.p1 GENE.S_Transcript_177749~~S_Transcript_177749.p1 ORF type:internal len:126 (+),score=23.51 S_Transcript_177749:3-377(+)
AAATGCTCGGGGAAATGGTCAACGAGCTTTAATCTAGCTGGCAAGGCTATAGGGGCTACATTGCATGTGAGCTTCGCGTTTTTGGTGACTAAGGCTAGTTTGACTGAATTGGATAGTGATGCCAATTTGCCCCTTGTTTTCAACTTAGAGCAAGATGGGTTAAACATGATGAACTTTGTTGCTGATGTAGGGCATGGCAAGGGCAATGCCATGCTTAGGCGGGCGGGTAGTGTTCCGAGTAGATTGACCCATGGTTCTTCTGATTCATCTCAGCGTCCGGATGTAAAGTTTGGTTGGTCAAAAGATTTGTCTGATTTCTCGAATTCCATCAATATGCTTTATGGAAAGCTTGAAGAAGGGATTGTTAATTGTCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177749.p1 GENE.S_Transcript_177749~~S_Transcript_177749.p1 ORF type:internal len:126 (+),score=23.51 S_Transcript_177749:3-377(+)
KCSGKWSTSFNLAGKAIGATLHVSFAFLVTKASLTELDSDANLPLVFNLEQDGLNMMNFVADVGHGKGNAMLRRAGSVPSRLTHGSSDSSQRPDVKFGWSKDLSDFSNSINMLYGKLEEGIVNCP

Click here to download the sequence:
Link to NCBI Protein BLAST