Transcript Information: S_Transcript_177785.p1


Annotated TAIR IDAT5G41370.1
Annotated Gene NameHomolog of xeroderma pigmentosum complementation group B 1
Annotated Gene Symbol(s)XPB1, ATXPB1
Annotation TypeOrtholog
Chromosome Positionchr5:16551337-16555792 | Forward length=767
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.908025951951
Replicate 217.604335798492
Replicate 315.757166787623
Condition 2: 8 Hour
Replicate 115.748468035089
Replicate 215.723453798798
Replicate 315.456364979541
Condition 3: 24 Hour
Replicate 118.793740774226
Replicate 216.265410091197
Replicate 316.302510128121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177785.p1 GENE.S_Transcript_177785~~S_Transcript_177785.p1 ORF type:3prime_partial len:673 (+),score=137.98,ERCC3_RAD25_C|PF16203.1|1.4e-107,Helicase_C_3|PF13625.2|5.7e-40,Helicase_C_3|PF13625.2|3.6e+03,ResIII|PF04851.11|9.9e-15,Helicase_C|PF00271.27|7.8e+03,Helicase_C|PF00271.27|3.2e-11 S_Transcript_177785:242-2257(+)
ATGGGATTTCACGGTGACAGCAAGGGCAGACCAAGCAAGAAACACAAGTCATCCAGGGATGATCGTCAGAAGAATGTAGACGATGATGAGTCCTATTTTACCCCTGAAGATTTCGACGATGACAGTAACCGTGAAGAAGGTGAAGCTAAAAAGAGAGATTTCACAAAGTTGGAACTCAAGCCTGATCACGCTAACCGCCCCCTATGGGCTTGTGCTGATGGACGCATTTTTCTTGAAACTTTCTCCCCTTTGTACAAACAAGCTTATGATTTCCTCATTGCCATTGCGGAGCCCGTTTGTAGGCCTGAGTCGATGCACGAGTACAACTTGACCCCACACTCGTTGTATGCTGCTGTGTCTGTTGGTCTCGAAACAGAAACAATTGTAACTGTGTTGAATAAGTTGTCTAAGACGAAGCTCCCCAAAGAAATGGTTGACTTTATTTATGCTTCCACTGCAAATTATGGAAAAGTTAAGCTCGTGCTTAAGAAGAATCGGTACTTCATTGAATCCCCGTTTCCGGAGGTGTTGAAAAAGTTGCTCAAAGATGAGGTTATTGGCAAGGCAAGGATTTCTGCTGAGGCTTCCCATGGAATGGATGGGTTTACGGTCAGTAAAGCATTGAGTGATATGGGGGGTGGTCATGGGGATCTCCTCAATGAAGCTGAATTGGCAGCTGCTGCAGAAGAAAAGGAGACCCACTCATTTGAAATTGAACCGTTACAGGTTGAAAATGTCAAGCAACAGTGCTTGCCAAATGCTCTAAATTATCCTATGCTGGAGGAGTATGATTTCAGGAATGACACAGTGAACCCTGACCTTGATATGGAGTTGAAGCCTCATGCACAACCACGTCCATACCAGGAGAAGAGTCTTAGTAAAATGTTTGGGAACGGTAGAGCAAGATCTGGTATCATTGTGTTACCATGTGGTGCAGGAAAGTCTCTAGTAGGTGTATCAGCTGCATGCCGTATAAAGAAGAGTTGCCTTTGTTTGGCCACAAATGCTGTGTCAGTGGATCAATGGGCTTTTCAGTTTAAGCTTTGGTCTACTATAAAGGATGAAAATATCTGTCGTTTCACTTCTGATAGCAAAGAGAGATTTCGTGGCAACGCTGGAGTAGTTGTGACAACATATAATATGGTTGCTTTTGGCGGTAAGCGTTCTGAAGAATCTGAGAAGATCATTGAAGAAATTAGAAATAGAGAATGGGGTTTACTCTTGATGGACGAGGTGCATGTTGTCCCTGCTCATATGTTTCGCAAAGTCATCAGTATTACTAAATCACACTGTAAACTTGGGCTGACTGCAACACTTGTGAGAGAGGATGAGAGGATCACAGATCTGAACTTCCTTATCGGTCCTAAATTGTATGAGGCCAACTGGTTGGATTTGGTAAAGGGTGGATTTATTGCCAATGTACAGTGTGCTGAAGTTTGGTGTCCAATGACAAAAGAGTTCTTTGCTGAATACCTGAAGAAAGAAAATTCCAAGAAAAAGCAGGCCTTATATGTGATGAACCCTAACAAGTTCAGAGCCTGTGAGTTCCTAATTAGATTTCACGAGAGGGAGCGTGGTGATAAAATTATTGTCTTTGCCGATAATCTTTTTGCACTCACCGAGTATGCTATGAAGCTTCGGAAGCCTATGATTTATGGTGCCACCAGCCATGTGGAGAGAACTAAAATATTGGAGGCCTTCAAAACTGGAAAGGATGTTAACACTATATTCCTGTCAAAGGTTGGTGATAACTCAATAGATATACCCGAAGCAAATGTAATAATCCAAATTTCATCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGACTTGGTCGTATTCTTAGGGCAAAGGGTCGAATTGAAGATAGGATGGCTGGGGGAAAAGAGGAGTATAATGCCTTCTTTTATTCCCTTGTATCTACAGATACACAGGAGATGTATTACTCAACTAAAAGGCAACAATTCTTGATTGACCAAGGTTACAGCTTTAAGGTCATAACGAGTTTACCACCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177785.p1 GENE.S_Transcript_177785~~S_Transcript_177785.p1 ORF type:3prime_partial len:673 (+),score=137.98,ERCC3_RAD25_C|PF16203.1|1.4e-107,Helicase_C_3|PF13625.2|5.7e-40,Helicase_C_3|PF13625.2|3.6e+03,ResIII|PF04851.11|9.9e-15,Helicase_C|PF00271.27|7.8e+03,Helicase_C|PF00271.27|3.2e-11 S_Transcript_177785:242-2257(+)
MGFHGDSKGRPSKKHKSSRDDRQKNVDDDESYFTPEDFDDDSNREEGEAKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVTVLNKLSKTKLPKEMVDFIYASTANYGKVKLVLKKNRYFIESPFPEVLKKLLKDEVIGKARISAEASHGMDGFTVSKALSDMGGGHGDLLNEAELAAAAEEKETHSFEIEPLQVENVKQQCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTGKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRIEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP

Click here to download the sequence:
Link to NCBI Protein BLAST