Transcript Information: S_Transcript_177967.p1


Annotated TAIR IDAT1G78110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29391879-29392907 | Forward length=342
E-Value4.5E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8056018537143
Replicate 21.1063935766305
Replicate 31.1424703768602
Condition 2: 8 Hour
Replicate 11.8872026829321
Replicate 21.3198730760901
Replicate 31.9492368016355
Condition 3: 24 Hour
Replicate 10.25775673735214
Replicate 21.0028235210773
Replicate 30.66961179836591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177967.p1 GENE.S_Transcript_177967~~S_Transcript_177967.p1 ORF type:complete len:339 (+),score=73.78 S_Transcript_177967:860-1876(+)
ATGAAAGGAAGAGAAACCAAAGGATTAGGAATAGGAAAGGGAGGAGTAGCCTCAGCAGATCTGCTAGTATGCTTCCCTTCAAGAGCCCACCTCAGCTTAATGCCCAAACCCATTTGCAGTCCCTCCAGACCTTCCGAACCCAACAAACGCCATCACCACCACCCTCCCTTAAAAAAGATCAACACCAGTAGGTTTGGTGGCGGTGGTGGCCCAGGCCCAGCTAGCCCGATTTTATGGGCCAAAAGTAAGCAAATGAGCGGCAACGGCCCGGAATTATCAGAGCCCACATCTCCAAAAGTGACGTGTGCGGGACAAATCAAAGTGAGGCCTAGAGCTTCAGGTGCTTGCAGGAACTGGCAATCTGTGATGGAGGAGATTGAGAGGATTCACAATCGGTCCAAGCTGAAGAAGAAGTCCACGTGGACTGAGGCTCTTGGGTTTAAGAAGGATGTCATGAACTTCTTGACTTGTTTGCGCAACCTCCGTTTCGATTTCCGGTGTTTCGGGTCGTTTCCTGAACCGGACATCACCTCCGACGACGACGACGAAGAAGAAGAAGTCGAAGAAGAGGAAAGAGAAATCTACGAAAAAGCTGGTGATCAAGGCAACACTGTGTTCTCCAAATGGTTTATGGTTTTGCAGGATAACAAAGAGAGCAATAATGATACAATGGAGAAAGAAATTAAACATGGGGAAGAAGATGACGACTTGGCAGTGCCACCACCCAATGCTCTGCTACTGATGAGGTGCAGGTCAGCCCCTGCTAAACAGAGAAGCAAAGAAACAGAGGTGGATACAAAAGATGATGAGGTGGCGAAGTCAAAGCAAGTGTCAGTGGTGGTAGAAGTGGAAGAAGAATCAGACAAGATTATTAACAAAAAGAAGAGAGAGAGTTTAGCGATTGTTATGAAATATGATACAGATTTCTACAATTTGTCTACAGACGTGGCTCAGGAAACTTGGCTTGTTGGTGGGTTCAGGGATCCTTTCTCCAGGAGTAGAAGCTGGAAGCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177967.p1 GENE.S_Transcript_177967~~S_Transcript_177967.p1 ORF type:complete len:339 (+),score=73.78 S_Transcript_177967:860-1876(+)
MKGRETKGLGIGKGGVASADLLVCFPSRAHLSLMPKPICSPSRPSEPNKRHHHHPPLKKINTSRFGGGGGPGPASPILWAKSKQMSGNGPELSEPTSPKVTCAGQIKVRPRASGACRNWQSVMEEIERIHNRSKLKKKSTWTEALGFKKDVMNFLTCLRNLRFDFRCFGSFPEPDITSDDDDEEEEVEEEEREIYEKAGDQGNTVFSKWFMVLQDNKESNNDTMEKEIKHGEEDDDLAVPPPNALLLMRCRSAPAKQRSKETEVDTKDDEVAKSKQVSVVVEVEEESDKIINKKKRESLAIVMKYDTDFYNLSTDVAQETWLVGGFRDPFSRSRSWKR*

Click here to download the sequence:
Link to NCBI Protein BLAST