Transcript Information: S_Transcript_177968.p1


Annotated TAIR IDAT1G22230.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7850093-7851037 | Forward length=314
E-Value7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43273172740131
Replicate 20.35874454565065
Replicate 30.44982283130733
Condition 2: 8 Hour
Replicate 10.52013147114959
Replicate 20.54565484487138
Replicate 31.5596961662182
Condition 3: 24 Hour
Replicate 10.53280203635596
Replicate 20.18425863070201
Replicate 30.20505727158631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_177968.p1 GENE.S_Transcript_177968~~S_Transcript_177968.p1 ORF type:5prime_partial len:123 (+),score=36.52 S_Transcript_177968:2-370(+)
CAACAGAGCAATGATGATAATGTTGGGAAAGAAATTAAACATAGGGAAAAAGATGATGACGTGGCAGTGCCACCACCCAATGCTCTGCTACTGATGAGGTGCAGGTCAGCCCCTGCTAAACAGAGAAGCAAAGAAACAGAGGTGGATACAAAAGATGATGAGGTGGCGAAGTCAAAGCAAGTGTCAGTGGTGGTAGAAGTGGAAGAAGAATCAGACAAGATTATTAACAAAAAGAAGAGAGAGAGTTTAGCGATTGTTATGAAATATGATACAGATTTCTACAATTTGTCTACAGACGTGGCTCAGGAAACTTGGCTTGTTGGTGGGTTCAATGATCCTTTCTCCAGGAGTAGAAGTTGGAAGCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_177968.p1 GENE.S_Transcript_177968~~S_Transcript_177968.p1 ORF type:5prime_partial len:123 (+),score=36.52 S_Transcript_177968:2-370(+)
QQSNDDNVGKEIKHREKDDDVAVPPPNALLLMRCRSAPAKQRSKETEVDTKDDEVAKSKQVSVVVEVEEESDKIINKKKRESLAIVMKYDTDFYNLSTDVAQETWLVGGFNDPFSRSRSWKR*

Click here to download the sequence:
Link to NCBI Protein BLAST