Transcript Information: S_Transcript_178048.p1


Annotated TAIR IDAT5G54510.1
Annotated Gene NameAuxin-responsive GH3 family protein
Annotated Gene Symbol(s)GH3.6, DFL1
Annotation TypeHomolog
Chromosome Positionchr5:22131321-22133564 | Reverse length=612
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27818468190084
Replicate 21.8449719490605
Replicate 30.96390606708714
Condition 2: 8 Hour
Replicate 11.4117854216917
Replicate 21.2472110739917
Replicate 30.5941699680831
Condition 3: 24 Hour
Replicate 10.91337491946735
Replicate 20.86864783045234
Replicate 30.79093519040434


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178048.p1 GENE.S_Transcript_178048~~S_Transcript_178048.p1 ORF type:3prime_partial len:287 (+),score=39.82,GH3|PF03321.9|1.5e-78 S_Transcript_178048:44-901(+)
ATGACGAGTCCAGCAGAAGCAGTGACAGAGACAAGAGAAGAGAAAGAAAAGGTTCAATACATTGAGAATTTGACACAGAATTGTGACGAGCTACAAAAGAAGGTTTTGGAGGAGATTTTGACCCAAAATGCGAATACCGACTACTTGAAAAGATTCGGGTTAGAAGGTGCTGCTGATAGACAGACTTTCAAGAGCAAGGTGCCTGCAGTCACTTACGAGGATATTCTGCCTGATATTCAGCGTATTGCTAATGGAGATTTCTCCCCCATTTTATGTGCTCATCCAATTACTGAATTCTATGCTAGTTCTGGAACTTCTGGAGGGGAGAGTAAACTTATCCCAGCAACTGCGGAATACAGAGATAGGAGGATGCAGTTCCACAACATTTACATGCCAATTCTAAATAGGTACATTCCAGGCTTGAATGAAGGAAAGGCACTTAACTTCCTATTCATAAAGGAAGAAACAACCACCCCAGGAGGCCTGGTGGTTCGCACCTTCGTAACAAGTGTTTGCAAAACCTATATGCACAGAAATGCCTCACGTACTATAAGCCCTGTTGAAGCCATCCTGTGCCTTGATTCCTTCCAATCTATGTACACTCAGATGCTCTGTGGCCTCTACAGCCACGACCAAGTTAATCGAATAGGGGCTATTTTTGCCTCTAGCCTCCTTCGAGTCATCCGTTTCCTTCAAGACCATTACACCGACCTATGCATTGACATTTCAACTGGTATCCTGAATTCGAAGGTAACAGACACTGATATTCGCGCCTGTATGGCTAAGATAATGAGGCCTGATCCTGAGCTTGCAGAATTCATTAACCATGAATGTAGGAATGAGAATTGGGAGGGGGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178048.p1 GENE.S_Transcript_178048~~S_Transcript_178048.p1 ORF type:3prime_partial len:287 (+),score=39.82,GH3|PF03321.9|1.5e-78 S_Transcript_178048:44-901(+)
MTSPAEAVTETREEKEKVQYIENLTQNCDELQKKVLEEILTQNANTDYLKRFGLEGAADRQTFKSKVPAVTYEDILPDIQRIANGDFSPILCAHPITEFYASSGTSGGESKLIPATAEYRDRRMQFHNIYMPILNRYIPGLNEGKALNFLFIKEETTTPGGLVVRTFVTSVCKTYMHRNASRTISPVEAILCLDSFQSMYTQMLCGLYSHDQVNRIGAIFASSLLRVIRFLQDHYTDLCIDISTGILNSKVTDTDIRACMAKIMRPDPELAEFINHECRNENWEGV

Click here to download the sequence:
Link to NCBI Protein BLAST