Transcript Information: S_Transcript_178181.p1


Annotated TAIR IDAT3G52590.1
Annotated Gene Nameubiquitin extension protein 1
Annotated Gene Symbol(s)UBQ1, EMB2167, ERD16, HAP4
Annotation TypeOrtholog
Chromosome Positionchr3:19505668-19506681 | Forward length=128
E-Value1.6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.075272777179
Replicate 21.7828516814153
Replicate 31.6766123712364
Condition 2: 8 Hour
Replicate 11.2924478980081
Replicate 20.22597826908815
Replicate 30.43062318393902
Condition 3: 24 Hour
Replicate 11.5445877215572
Replicate 21.3735643379605
Replicate 32.547681253042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178181.p1 GENE.S_Transcript_178181~~S_Transcript_178181.p1 ORF type:3prime_partial len:99 (+),score=15.87,ubiquitin|PF00240.19|9.1e-16,Rad60-SLD|PF11976.4|5.1e-07 S_Transcript_178181:104-397(+)
ATGTCAAAGCCAAGATTCAAGACAAAGTTCCCCCTTTTCCCTTCAATTCAATTCAACTTTCCTTCAAATTTTTATTTCAATCACTTTCTTTCTTTCTTTTCAAATTACGCAGGAATTCCACCAGACCAACAGCGTTTGATCTTCGCCAGTAAGCTGCTCGAAGATGGCCGTACTCTTGCTGATTACAACATCCAGAAAGAGTCGACACTTCACCTGGTGTTGAGGCTGAGGAGAGGAATCATTGAGCTCTCTTTGATGGCTTTGGCTCGTAAATTCAACCAAGACAAGATGATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178181.p1 GENE.S_Transcript_178181~~S_Transcript_178181.p1 ORF type:3prime_partial len:99 (+),score=15.87,ubiquitin|PF00240.19|9.1e-16,Rad60-SLD|PF11976.4|5.1e-07 S_Transcript_178181:104-397(+)
MSKPRFKTKFPLFPSIQFNFPSNFYFNHFLSFFSNYAGIPPDQQRLIFASKLLEDGRTLADYNIQKESTLHLVLRLRRGIIELSLMALARKFNQDKMI

Click here to download the sequence:
Link to NCBI Protein BLAST