Transcript Information: S_Transcript_178192.p1


Annotated TAIR IDAT1G79950.1
Annotated Gene NameRAD3-like DNA-binding helicase protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30073580-30079537 | Forward length=1040
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3311354951372
Replicate 24.6504899557507
Replicate 34.3756295414033
Condition 2: 8 Hour
Replicate 14.7250374624236
Replicate 26.1632249683953
Replicate 36.9380994165233
Condition 3: 24 Hour
Replicate 13.4480649431232
Replicate 24.0883738529882
Replicate 33.560759210134


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178192.p1 GENE.S_Transcript_178192~~S_Transcript_178192.p1 ORF type:complete len:1020 (+),score=185.04,Helicase_C_2|PF13307.2|2.4e-56,Helicase_C_2|PF13307.2|2.1e+03,DEAD_2|PF06733.11|1.4e-46,DEAD_2|PF06733.11|8.3e+03,DEAD_2|PF06733.11|9.3e+03,ResIII|PF04851.11|0.00058,ResIII|PF04851.11|53 S_Transcript_178192:204-3263(+)
ATGCCGATTTACAATATCAGAGGAATTGACGTCGATTTTCCTTACAATGCTTATGATTCTCAGATCACTTACATGGATAAAGTCATCCAAGCTCTCCAAGAAAAAAGTAACGCGTTGTTGGAAAGTCCTACCGGAACTGGGAAGACATTGTGTCTTCTTTGCGCTACTTTGGCCTATAGGAAGAGTTTGGGTCCTTTCTCCACTGGTCAGACTGTAAAGAAAAATGATTCCTCTAAGGTCTCATCATCGCAGAAAAGTGGCACTCTGCTGCCTAAAATTGTCTATACATCACGCACTCACAGTCAGCTGCGACAGGTGGTCCAAGAATTAAAAAGAACCAATTACAGGCCGAAGATGATCATTTTTGGGTCTCGTGAGCAGTTATGCATCCATGACAAAGTCAGATTACTTCGTGGAAAGGCACAAATCAATGCCTGCTATTTTTATAGGAAACGGCGCTCCAAGCACTATTGCAAACATCATAGGCTGACAGCAGATTTTATCAAAAATAATCCTCATATTGGAGATGAACCTGTTGATATAGAAGATCTGGTCAATATTGGGAGAAGCTCTGGACCGTGTCCGTACTACATGTCACGTGAGTTGCTCGAAGTTGTTGACATCTTCTTTGCACCCTACAACTATCTCATCGATCGATCATACAAAGATTCACTTGGAATAGAGTGGTACAATAGCATATTGATATTTGATGAAGCTCATAATTTGGAAAGCATTTCTGCAGATGCAGCCTCCTTTGACTTGCCTTCTGCAATGTTGTTGGCCTGCATTTCTGAAGCAAAAACTTGTGTTGATCTTTCTATCAAAAGAAGAGACAGAGAGAAGTCAAATGACAAGAGTTGTGACCCTGACAATTTCGCTATTCTCAGGGCTCTTTTATTGAAACTACAGAAGAAGATTGCTGAAGTGCCTATTGACTCTAGAGAACTTGGTTTTACTAGGCCTGGTCCTTATATTTATGAACTACTTGCTGACCTAAATGTCTCAACTAAAACTGTGAACATGCTCACTGGGATTATCGAGGAAGCTGTTTTGCTTCTTGAAGAAGATGCAAATGGGAATGAAAGCAAGGACTCGCATGGAACCTCTTGTAGGTTGGAGACCATAGGCGATATTCTGAAAATCATCTTCAGAGATGGAGGTACTTCTCATGCAAAGTACTATCGTCTACATGTTCAGGAGCGTTTGGCAACTGCTGGTGAGGATTTTAAAGGTGGTGGATCTAAGGGTAGGACACTCAGCTGGTGGTGCTTTAATCCAGGAATTTGCATGGAGGATTTCTCCAGGAGGGGTGTTGGCTCTGTGATTTTAACTTCTGGAACATTGTCTCCCTTGGACTCCTTCGCATATGAATTAAAGCTGGAATTCCCTATACGACTGGAGAACCCTCATGTTATATCGTCAAATCAGATCTGGGCTGGAGTTGTATCAGCAGGTCCATCTGGTTACTCTTTCAACTCGTCATATAGGAATCGTGATGTTCCAGAATACAAACAGGACCTTGGAAATGCCATTGTCAATTTTGCTCGGATTGTGCCTGATGGGCTTCTTGTATTCTTCCCATCATACTACTTGATGGAACAATGCATTAGCTGCTGGAAGTCGCATGGGAGCTCCACCACCCAAAGTACAATATGGGAAAGAATATGCAGATATAAGCAGCCCGTCATAGAACCGAGACAATCTTCACTATTTTCATCATCAATTGAGGACTTCATGTCTAAGCTAAATGATCGTTCTAGATCTGGAGCAGTCTTTTTCGCTGTTTGTCGTGGCAAGGTTAGTGAAGGATTGGATTTCGCAGACCAATGTGGGAGGGCTGTGATTGTTACTGGGTTGCCATTTGCCATGCAGACAGATCCCAAGGTCCGCCTCAAACGTGAATATCTAGATGAGCAGGCAAGGACCCAAACTATGGTTCATAAGCCTTTGTCAGGGGAGGAATGGTACAATCAGCAAGCTTCTCGAGCTGTCAATCAGGCTGTTGGACGTGTCATTCGTCATCGCTATGATTATGGTGCCATTATATTCTGTGATGAAAGGTTTTCATCGTCACATCGTCAAGCTCAGGTATCAAGCTGGATGCAGCCTCATATCAAGTGCCACCCCAAATTTGGAGATGTAGTGTACTCCTTGACCCATTTCTTTCGTATTGGAGTCCATCATCCTGTAGAGATAGAGCCATTGGAATCTATAAGAAAAGGAAATTCCTTTGGAGAAAAGGTTGCTGAGCCTGTGGACAAATGCTGTCCCAAAAAAAAATGTAATCTCCTGGCTGTGGATGAAGACTGCTGTATAGTGTCATCTTCAGCCAGAACAAGTGTTGAAAGAGGCAACAACTATAATAGGTTGAAAGAAATTCTTCCTGCTAATAGATCATGCATCACACAACAAAATGAAATGCAGGGTGTTATACTGAAGCAAGAAACTCTGTTATTTGGGAAGGCCAGGAAGCTGCTCCATCCTAAGACCGAATTTAAAATCTCTGAGACAATTGACTTGAGTAGCGACGATTCGCATGGAATTCCAGATGAAGAATTGATTGTACGATGCTCGTCGAAGAGGTCGAAAATCATTGGGATGTCATCTGATACGGTGAATGCACATTCCCGAGACACCTCATTATTGAAGGATTCAAGGAAACAAGAAAGGGTTGAAATTACTTCCACCACAAAAATGAAACATATCGCTGTTAGCTCTTCTACAGAGGTTTCTAGAAATATATCTGCACAAGCAAAGACTTCCAACCAGGCAAGCCATGTGGCTATGTCTGTACCCTGTCAGGATGAAGAAGCTAATGAACCGGATTTTCTAACTCAGGTCAAGCAGAAACTCACTGAATCAGAGTATGGAGAATTTGTTGGCTATCTGAAGACAATGAAGTCAAAAGCTATGAACTTTGGTTCTGTTTTGCGATCCATTGTAGAACTCTTTTCTCGGCAAGATAGGCTTCCTCTTCTAAGAAGATTCAAGCAATTCATCCCTGAGAAGTACCATGCTTTGTATGATCAACATTGTACTTCAACTGGTGGAGCCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178192.p1 GENE.S_Transcript_178192~~S_Transcript_178192.p1 ORF type:complete len:1020 (+),score=185.04,Helicase_C_2|PF13307.2|2.4e-56,Helicase_C_2|PF13307.2|2.1e+03,DEAD_2|PF06733.11|1.4e-46,DEAD_2|PF06733.11|8.3e+03,DEAD_2|PF06733.11|9.3e+03,ResIII|PF04851.11|0.00058,ResIII|PF04851.11|53 S_Transcript_178192:204-3263(+)
MPIYNIRGIDVDFPYNAYDSQITYMDKVIQALQEKSNALLESPTGTGKTLCLLCATLAYRKSLGPFSTGQTVKKNDSSKVSSSQKSGTLLPKIVYTSRTHSQLRQVVQELKRTNYRPKMIIFGSREQLCIHDKVRLLRGKAQINACYFYRKRRSKHYCKHHRLTADFIKNNPHIGDEPVDIEDLVNIGRSSGPCPYYMSRELLEVVDIFFAPYNYLIDRSYKDSLGIEWYNSILIFDEAHNLESISADAASFDLPSAMLLACISEAKTCVDLSIKRRDREKSNDKSCDPDNFAILRALLLKLQKKIAEVPIDSRELGFTRPGPYIYELLADLNVSTKTVNMLTGIIEEAVLLLEEDANGNESKDSHGTSCRLETIGDILKIIFRDGGTSHAKYYRLHVQERLATAGEDFKGGGSKGRTLSWWCFNPGICMEDFSRRGVGSVILTSGTLSPLDSFAYELKLEFPIRLENPHVISSNQIWAGVVSAGPSGYSFNSSYRNRDVPEYKQDLGNAIVNFARIVPDGLLVFFPSYYLMEQCISCWKSHGSSTTQSTIWERICRYKQPVIEPRQSSLFSSSIEDFMSKLNDRSRSGAVFFAVCRGKVSEGLDFADQCGRAVIVTGLPFAMQTDPKVRLKREYLDEQARTQTMVHKPLSGEEWYNQQASRAVNQAVGRVIRHRYDYGAIIFCDERFSSSHRQAQVSSWMQPHIKCHPKFGDVVYSLTHFFRIGVHHPVEIEPLESIRKGNSFGEKVAEPVDKCCPKKKCNLLAVDEDCCIVSSSARTSVERGNNYNRLKEILPANRSCITQQNEMQGVILKQETLLFGKARKLLHPKTEFKISETIDLSSDDSHGIPDEELIVRCSSKRSKIIGMSSDTVNAHSRDTSLLKDSRKQERVEITSTTKMKHIAVSSSTEVSRNISAQAKTSNQASHVAMSVPCQDEEANEPDFLTQVKQKLTESEYGEFVGYLKTMKSKAMNFGSVLRSIVELFSRQDRLPLLRRFKQFIPEKYHALYDQHCTSTGGAS*

Click here to download the sequence:
Link to NCBI Protein BLAST