Transcript Information: S_Transcript_17857.p2


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4127713819712
Replicate 24.6517929789941
Replicate 34.6662344307905
Condition 2: 8 Hour
Replicate 17.707972403783
Replicate 29.4339120769932
Replicate 37.5761145102042
Condition 3: 24 Hour
Replicate 15.3954230308094
Replicate 26.6899202845845
Replicate 36.0776010614738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17857.p2 GENE.S_Transcript_17857~~S_Transcript_17857.p2 ORF type:complete len:166 (-),score=32.57,Dimer_Tnp_hAT|PF05699.10|2.7e-12 S_Transcript_17857:35-532(-)
ATGAAATGCTTTCGAAGACTCTTCCCAAGTGATGACGATTATGACAAGGTGTTGGATGAGTTTGGTTATTTTTCTCTCAAGACGGGACCTTTCTCAGATATTACTTCTCTTTCTAGGAGGGGCACTACTGATCCTAAAACTTGGTGGGCTAACTTTGGTGCGCAAACACCATTGCTCCAATCACTAGCTTTTAGAGTGCTTGGCCAACCTACCTCTTCCTCTTGTTGTGAGCGAAACTGGAGCACTTACTCCTTTATTCACTCACTTAGGAGGAACAAGCTAACCCCTAAACGTGCCGAAGATTTAGTTTTCATCCACAACAACCTACGTCTCTTATCAAGGAGCACCGATCAATATCATGATGAGAAGACCAAGATGTGGGATGTTGGTGGTGATGAGTTTGATAATTTTGAAGATATGGGGTTTTTGGAGCTTGCCGAGCTATCTCTTGATGAGCCCGAGTTGGAGAATGTGTTTTTCAATGATAATGTCGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17857.p2 GENE.S_Transcript_17857~~S_Transcript_17857.p2 ORF type:complete len:166 (-),score=32.57,Dimer_Tnp_hAT|PF05699.10|2.7e-12 S_Transcript_17857:35-532(-)
MKCFRRLFPSDDDYDKVLDEFGYFSLKTGPFSDITSLSRRGTTDPKTWWANFGAQTPLLQSLAFRVLGQPTSSSCCERNWSTYSFIHSLRRNKLTPKRAEDLVFIHNNLRLLSRSTDQYHDEKTKMWDVGGDEFDNFEDMGFLELAELSLDEPELENVFFNDNVV*

Click here to download the sequence:
Link to NCBI Protein BLAST