Transcript Information: S_Transcript_178708.p1


Annotated TAIR IDAT4G39100.1
Annotated Gene NamePHD finger family protein / bromo-adjacent Homology (BAH) domain-containing protein
Annotated Gene Symbol(s)SHL1
Annotation TypeHomolog
Chromosome Positionchr4:18218298-18220134 | Reverse length=228
E-Value7E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2770894842254
Replicate 23.7427946570784
Replicate 32.3053420104501
Condition 2: 8 Hour
Replicate 14.3793212258398
Replicate 22.7964810799658
Replicate 33.6160812901308
Condition 3: 24 Hour
Replicate 14.8760900648648
Replicate 23.4400428285527
Replicate 33.8283460257766


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178708.p1 GENE.S_Transcript_178708~~S_Transcript_178708.p1 ORF type:5prime_partial len:112 (+),score=11.20 S_Transcript_178708:2-337(+)
GTCGGAAACGACGACTTCTTCTGTCGTTTCGAGTATAATTCCTCCACTGGTGCCTTCACTCCTGATCGCGTCGCCGTGTTCCATCCTGCTTGTATCGACATGACTGCAGAAGAAGCTAAAAGACTTGACCACTTCTTTTGCCAAAATTGTTCCCCTGATGATCAGAAGAAGTTGCAAAGTGCACATGCTGCTTCTAGACATTCAGATACGAAGGTATTCCACTTGTATGCTTGGTATTATTTTGCTTATATTGATTTTCTTTCCGTGTTCGTTCTGACGGGAATTCTACCTCATGTTGGCGAAATACATGCTTTATTCACTGCCGTTTTCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178708.p1 GENE.S_Transcript_178708~~S_Transcript_178708.p1 ORF type:5prime_partial len:112 (+),score=11.20 S_Transcript_178708:2-337(+)
VGNDDFFCRFEYNSSTGAFTPDRVAVFHPACIDMTAEEAKRLDHFFCQNCSPDDQKKLQSAHAASRHSDTKVFHLYAWYYFAYIDFLSVFVLTGILPHVGEIHALFTAVFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST