Transcript Information: S_Transcript_178820.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value6.8E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3482377756488
Replicate 29.4255588299509
Replicate 38.8711895085674
Condition 2: 8 Hour
Replicate 110.021583740805
Replicate 211.008931846448
Replicate 39.443729951574
Condition 3: 24 Hour
Replicate 18.2263959980402
Replicate 28.3554874957103
Replicate 38.8995504783875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178820.p1 GENE.S_Transcript_178820~~S_Transcript_178820.p1 ORF type:complete len:632 (+),score=140.72,zf-RING_UBOX|PF13445.2|1.2e-08,zf-RING_2|PF13639.2|2.3e-08,zf-C3HC4_2|PF13923.2|8.7e-07,zf-C3HC4|PF00097.21|2e-06 S_Transcript_178820:828-2723(+)
ATGGCGGGAAACTGGTACGGCACTTTTTTCGACGCCATGAACATCGTTACCGGCGACATCCACAACCCTCCATATCCAGCAGAAGAACAAGAGCACGATGAAGATGAAGATGAATTCGTCGACGAAGATGATGACGATGACTATGAAGATGAAGAAGATGAGGAAGAAGAAGAAGAAGATGATGTGCAAGTACTCAATGAGATACCTCCTCCTCCTCAACCGTCATCCCCTAATCCTGTTCCTGTTGCTGCTACGGCGTCGTCTAGGGTTGAGGAGACAGAAGAGGATTTGAGTTTGATGGATTTTGAAAAGCATTATAGTCCGAAAGAAACGACTAGAGAAGAAATTGATGGCTTGTTTTGTCCTATTTGTATGGAGCCTTGGTCTAATGCCGGTGATCATCAACCTAGCTGTCTTGCTTGCGGGCATTTGTTTGGAATGTCTTGCATTAAAAAGTGGCTTGGTCAACGAAGAAACTCAGGGAAGTGCCCCCAATGCAACAAGAAGTGTACATTGAAGGATGTCAGGAGGATCTATGGGTCACAAGTAGTTGTAGTTGATGAAGAATCACAGAAGAGAATACGATTTCTTGAGGCTAAATGTAATGCTCTTCAGAAAAAGGATGAAGAATGGCGCAAGAAGGAAGTGGAGTGGCATATGAAAGTATTAGTTTGTCAGAAGAAAGAGACGGAGTTATGTCAGCAGTTACAGCAGCTTAATGAGAGGTCCAGCAACCTTGAGCGTACGCTAAAAGGCCTAGAAGGTAAACCACTGAGCTTAAGTGGTGCTGCTAATGGCTTTGATGGGCGATCAACTAGAGAGCACCAAGTTGGAAGAACTGCTACTCCACTATCTTGTGGTTCTTTTGAATTCCAGCAAGAGTTGCTCTTAAATGGTGCACGATATTTTGATGTGGATAAATCAGGACATGTTTTGATTATTGCTCGAAGACCTAATCAGATTGGTGGATCCCACAGTCTTACCAAAATGAGTTTACTTTCTCCTCGGGAACAATCGCATATGCAACTTCCTTCTTCAATCAAAGCAGTTAGGGATTTGCATTTTTCTTCTTTTGGTAGACTTGCACTGCTGGCTTCATTGGGGAAGAAATTATCGGTTGTAAGTATGGAAAGTAACAATATCGTTCTCAACTATGATTTACCGGCTGCTGCTTGGTCTTGTTCATGGGATATCAACAATCCACATTATGCTCTTGCTGGACTACAGAACGGCATGCTTCTAGTGTTTGATTTGCGTCAAACTGCGAGGCCTTTGGAATCGAGGAACGGATTGACATGCAACCCTATACATACCATACTTTCTCTTTCAGATGATTCAACGGTTGATCCAAGAGTTACAAGGCTCCTCACTGCTTCTTCTGTTGGGTTGTGCGAGTGGAACATTGGTGGTGCAAATGAACAGCCTTCCTTGATTGCAGAGACAGTAAATCAAGGAGTTTGTATAGCCCTTGCTTCTGATTACGAGAATGTTGTTGCTACATTTCGCCCTAGAGTCGGGTTGCCTGATGAGATTGGCTCTCAACTGTCACAAGTACCTTCCTCTAACATAGGGAGCTATGTTCAGGGTTCACATGTCTTCCTTGAGAGAACTGACTCTGGCTATGAAAAGTTGGGGTCAACTAGTGCGTATGTTCCTGGAATACGTCTCCCAAAATATGCTGTTTTAAGAGCTGGTGCTGAAAGCTCATTATTTGTTTCTGGAGATGAAACAACATCTAACTTGGTTTTGCAAGAGTTGCCCTCATTAGCAGAGACCCAGCGCCTTAAATCTTATTATCCTATTTGTGATGTGAAGTACATCCCTTCTCAGAAACTAGGTTTACTTTGCTGCTTAACCGAGGACAAAATGCAGTTCTTCACTCACAATCAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178820.p1 GENE.S_Transcript_178820~~S_Transcript_178820.p1 ORF type:complete len:632 (+),score=140.72,zf-RING_UBOX|PF13445.2|1.2e-08,zf-RING_2|PF13639.2|2.3e-08,zf-C3HC4_2|PF13923.2|8.7e-07,zf-C3HC4|PF00097.21|2e-06 S_Transcript_178820:828-2723(+)
MAGNWYGTFFDAMNIVTGDIHNPPYPAEEQEHDEDEDEFVDEDDDDDYEDEEDEEEEEEDDVQVLNEIPPPPQPSSPNPVPVAATASSRVEETEEDLSLMDFEKHYSPKETTREEIDGLFCPICMEPWSNAGDHQPSCLACGHLFGMSCIKKWLGQRRNSGKCPQCNKKCTLKDVRRIYGSQVVVVDEESQKRIRFLEAKCNALQKKDEEWRKKEVEWHMKVLVCQKKETELCQQLQQLNERSSNLERTLKGLEGKPLSLSGAANGFDGRSTREHQVGRTATPLSCGSFEFQQELLLNGARYFDVDKSGHVLIIARRPNQIGGSHSLTKMSLLSPREQSHMQLPSSIKAVRDLHFSSFGRLALLASLGKKLSVVSMESNNIVLNYDLPAAAWSCSWDINNPHYALAGLQNGMLLVFDLRQTARPLESRNGLTCNPIHTILSLSDDSTVDPRVTRLLTASSVGLCEWNIGGANEQPSLIAETVNQGVCIALASDYENVVATFRPRVGLPDEIGSQLSQVPSSNIGSYVQGSHVFLERTDSGYEKLGSTSAYVPGIRLPKYAVLRAGAESSLFVSGDETTSNLVLQELPSLAETQRLKSYYPICDVKYIPSQKLGLLCCLTEDKMQFFTHNQF*

Click here to download the sequence:
Link to NCBI Protein BLAST